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MS018541 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018541
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold417:521185..521399
RNA-Seq ExpressionMS018541
SyntenyMS018541
Gene Ontology termsGO:0016641 - oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72727.1 hypothetical protein VITISV_015094 [Vitis vinifera]4.1e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

CAN75609.1 hypothetical protein VITISV_002943 [Vitis vinifera]1.2e-1052.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

RVW16218.1 hypothetical protein CK203_074294 [Vitis vinifera]4.1e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

RVW41830.1 hypothetical protein CK203_108403 [Vitis vinifera]1.2e-1052.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

RVX17758.1 putative ribonuclease H protein [Vitis vinifera]1.2e-1050.72Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+ + +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

TrEMBL top hitse value%identityAlignment
A0A438BZ23 zf-RVT domain-containing protein2.0e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

A0A438GJ06 Flowering time control protein FY5.8e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

A5B978 Reverse transcriptase domain-containing protein5.8e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

A5BV05 Uncharacterized protein2.0e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

A5BZG3 Reverse transcriptase domain-containing protein5.8e-1152.17Show/hide
Query:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV
        SKVP KVK L W++  GK+NT DKLQ   P   L P WCILC+R  +S  H+F+HCP     W +LFN+
Subjt:  SKVPKKVKVLLWILLQGKLNT-DKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTCCAAAGTTCCCAAAAAAGTGAAAGTTTTACTCTGGATTCTGTTACAAGGCAAGTTGAACACAGACAAGCTCCAAAGAACAGTGCCAAATTGCAGACTCCAACCCAG
CTGGTGTATTCTGTGCAGAAGATACACAAAGAGCCACTTCCACGTTTTTATCCATTGCCCCTTTGCTACTGCTTGTTGGGCTAAGCTTTTTAATGTCTTT
mRNA sequenceShow/hide mRNA sequence
AAGTCCAAAGTTCCCAAAAAAGTGAAAGTTTTACTCTGGATTCTGTTACAAGGCAAGTTGAACACAGACAAGCTCCAAAGAACAGTGCCAAATTGCAGACTCCAACCCAG
CTGGTGTATTCTGTGCAGAAGATACACAAAGAGCCACTTCCACGTTTTTATCCATTGCCCCTTTGCTACTGCTTGTTGGGCTAAGCTTTTTAATGTCTTT
Protein sequenceShow/hide protein sequence
KSKVPKKVKVLLWILLQGKLNTDKLQRTVPNCRLQPSWCILCRRYTKSHFHVFIHCPFATACWAKLFNVF