; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018545 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018545
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-binding storekeeper protein-related transcriptional regulator
Genome locationscaffold417:569032..569697
RNA-Seq ExpressionMS018545
SyntenyMS018545
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585873.1 putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3747.71Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YSK FYEFVKK+L   QVSMHQ+ NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
          +++YL+N EC    N LKF    SE H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K DAKL EL
Subjt:  HVQLLSNKCKLDAKLTEL

XP_022158994.1 probable transcription factor At4g00610 [Momordica charantia]2.8e-11498.2Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNKIRG
        SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTK KTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYS+EFYEFVKKKLGGQVSMHQMRNKIRG
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNKIRG

Query:  LRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL
        LRRKYLENDECNGLKFCGSGS+QHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVE LEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL
Subjt:  LRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL

Query:  SNKCKLDAKLTELCIQFLNTPT
        SNKCKLDAKLTELCIQFLNTPT
Subjt:  SNKCKLDAKLTELCIQFLNTPT

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]8.2e-3747.71Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YSK FYEFVKK+L   QVSMHQ+ NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
          +++YL+N EC    N LKF    SE H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K DAKL EL
Subjt:  HVQLLSNKCKLDAKLTEL

XP_022973281.1 probable transcription factor At1g61730 [Cucurbita maxima]6.3e-3748.62Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD++Y++E ES  +SE++ +          +K + K+  L  +W+EEDE+ VL+QLYEF G NA+YSK FYEFVKK+L   QVSMHQ  NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
          +++YL+N EC    N LKF    SE H+ +V   SKRIWGA  +++     NGGG +    Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K + KL EL
Subjt:  HVQLLSNKCKLDAKLTEL

XP_023521141.1 probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]6.3e-3747.47Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD+EY++E ES  +SE++ +R           +KK+      +W EEDE+ VL+QLY+F G NA+YSK FYEFVKK+L   QVSM+QM NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLEND---ECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMH
          +++YL+N+   + N LKF    SE H+ +V   S+RIWG        ++K+ GG     +Y +GF E LEEM+I++DCL PSCLE   K+WE+Q LM+
Subjt:  GLRRKYLEND---ECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMH

Query:  VQLLSNKCKLDAKLTEL
        ++LLS K K DAKL EL
Subjt:  VQLLSNKCKLDAKLTEL

TrEMBL top hitse value%identityAlignment
A0A6J1DXL5 probable transcription factor At4g012604.0e-1331.47Show/hide
Query:  DERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKT------KKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNK
        D+  ++++   E+E E   +    +R R +   K  +       KK   + F W   DE  +LK  YEF+GKN +YSK+FY FVK KL   VS  Q+ +K
Subjt:  DERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKT------KKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNK

Query:  IRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQY----ERGFVECLEEMEIEMDCLKPSCLEFLYKDWE
        +  LR+++L+ DEC G             K+   S  IWG+  N N    ++GG     E      E  F   +E +++++ C+ P+ L  + KDWE
Subjt:  IRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQY----ERGFVECLEEMEIEMDCLKPSCLEFLYKDWE

A0A6J1E125 probable transcription factor At4g006101.4e-11498.2Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNKIRG
        SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTK KTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYS+EFYEFVKKKLGGQVSMHQMRNKIRG
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNKIRG

Query:  LRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL
        LRRKYLENDECNGLKFCGSGS+QHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVE LEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL
Subjt:  LRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLL

Query:  SNKCKLDAKLTELCIQFLNTPT
        SNKCKLDAKLTELCIQFLNTPT
Subjt:  SNKCKLDAKLTELCIQFLNTPT

A0A6J1GK86 probable transcription factor At1g664204.0e-3747.71Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YSK FYEFVKK+L   QVSMHQ+ NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
          +++YL+N EC    N LKF    SE H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K DAKL EL
Subjt:  HVQLLSNKCKLDAKLTEL

A0A6J1I882 probable transcription factor At1g617303.0e-3748.62Show/hide
Query:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR
        SSED  +SD++Y++E ES  +SE++ +          +K + K+  L  +W+EEDE+ VL+QLYEF G NA+YSK FYEFVKK+L   QVSMHQ  NKI 
Subjt:  SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKL-GGQVSMHQMRNKIR

Query:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
          +++YL+N EC    N LKF    SE H+ +V   SKRIWGA  +++     NGGG +    Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  GLRRKYLENDEC----NGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K + KL EL
Subjt:  HVQLLSNKCKLDAKLTEL

A0A6P5XDB4 STOREKEEPER protein-like1.1e-0534.58Show/hide
Query:  WREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSG-----SEQHQRKVLAWSKRIWGAAEN
        W E DE+ +LK + E+  K  +     S  F++F+K+ +   VS +Q+  KIR L++KY  N E      C +G     S+ H  K    SK+IWG   N
Subjt:  WREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSG-----SEQHQRKVLAWSKRIWGAAEN

Query:  ENENKNK
        E  NK +
Subjt:  ENENKNK

SwissProt top hitse value%identityAlignment
O23077 Transcription factor STKL21.9e-0430.28Show/hide
Query:  RHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVL
        +  K +   KKA     W EEDE+ +L+ + +F  +  T    +   F++  KK +   VS  Q  +KIR L+ KY  N +        SG   H +K L
Subjt:  RHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVL

Query:  AWSKRIWGA
          +  IWG+
Subjt:  AWSKRIWGA

Q9SYA9 Probable transcription factor At1g617307.0e-0734.17Show/hide
Query:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWG
        KK       W EEDE+ VL+ + +F   +GK+    +  FY+F+KK +  +VS +Q  +KIR LR+KY+  +  N   F     + H +K    SK IWG
Subjt:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWG

Query:  AAENE-NENKNKNGGGTRSV
              + N   NG   +SV
Subjt:  AAENE-NENKNKNGGGTRSV

Arabidopsis top hitse value%identityAlignment
AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator5.0e-0834.17Show/hide
Query:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWG
        KK       W EEDE+ VL+ + +F   +GK+    +  FY+F+KK +  +VS +Q  +KIR LR+KY+  +  N   F     + H +K    SK IWG
Subjt:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIWG

Query:  AAENE-NENKNKNGGGTRSV
              + N   NG   +SV
Subjt:  AAENE-NENKNKNGGGTRSV

AT4G00250.1 DNA-binding storekeeper protein-related transcriptional regulator1.4e-0530.28Show/hide
Query:  RHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVL
        +  K +   KKA     W EEDE+ +L+ + +F  +  T    +   F++  KK +   VS  Q  +KIR L+ KY  N +        SG   H +K L
Subjt:  RHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVL

Query:  AWSKRIWGA
          +  IWG+
Subjt:  AWSKRIWGA

AT4G00610.1 DNA-binding storekeeper protein-related transcriptional regulator2.6e-0429.03Show/hide
Query:  EDERSSDTEYRVESESESDSE------------DEQR----RRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEF---SGKNATYSKE-FYEFVK
        EDE SSD+E   ESES++++E            +E+R    +    R  T+ +T KK       W +EDE+  L+ + +F   +GKN +     F+E +K
Subjt:  EDERSSDTEYRVESESESDSE------------DEQR----RRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEF---SGKNATYSKE-FYEFVK

Query:  KKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIW---GAAENENENKNKNGGGTRSVEQYERGFVE
          +  +V   Q  NKIR ++RKY+EN +          + +H +K    ++ IW   G A    + K K        + +ER FV+
Subjt:  KKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSEQHQRKVLAWSKRIW---GAAENENENKNKNGGGTRSVEQYERGFVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAGTGAGGACGAGAGATCATCAGATACAGAGTACAGAGTGGAGTCTGAGAGTGAATCGGATTCGGAAGACGAACAGCGTCGCCGAAGAAGAAGAAGAAGGCACACGAA
ACTGAAAACAAAGAAAAAGAAAGCTGCATTATCATTCAAATGGCGGGAAGAGGATGAAGTGTTTGTGTTGAAACAACTGTATGAATTCTCAGGGAAGAACGCGACGTATT
CGAAGGAGTTCTATGAATTTGTGAAGAAGAAATTAGGCGGCCAAGTTTCGATGCATCAGATGAGGAACAAAATACGTGGGTTGAGAAGGAAATATTTGGAGAATGATGAG
TGCAATGGCCTCAAATTCTGTGGGTCTGGGTCTGAACAGCACCAACGGAAGGTGCTTGCATGGTCGAAGAGAATATGGGGAGCAGCCGAGAACGAGAACGAGAACAAAAA
CAAGAACGGAGGAGGCACACGCAGCGTGGAGCAATATGAAAGAGGATTTGTGGAGTGTCTTGAGGAGATGGAGATTGAGATGGATTGTTTGAAGCCTTCATGTTTGGAAT
TTCTTTACAAGGACTGGGAAATTCAAACACTTATGCACGTTCAGCTTTTGTCCAACAAGTGCAAGTTGGATGCCAAGCTCACGGAATTGTGTATCCAATTTCTAAACACC
CCGACC
mRNA sequenceShow/hide mRNA sequence
TCAAGTGAGGACGAGAGATCATCAGATACAGAGTACAGAGTGGAGTCTGAGAGTGAATCGGATTCGGAAGACGAACAGCGTCGCCGAAGAAGAAGAAGAAGGCACACGAA
ACTGAAAACAAAGAAAAAGAAAGCTGCATTATCATTCAAATGGCGGGAAGAGGATGAAGTGTTTGTGTTGAAACAACTGTATGAATTCTCAGGGAAGAACGCGACGTATT
CGAAGGAGTTCTATGAATTTGTGAAGAAGAAATTAGGCGGCCAAGTTTCGATGCATCAGATGAGGAACAAAATACGTGGGTTGAGAAGGAAATATTTGGAGAATGATGAG
TGCAATGGCCTCAAATTCTGTGGGTCTGGGTCTGAACAGCACCAACGGAAGGTGCTTGCATGGTCGAAGAGAATATGGGGAGCAGCCGAGAACGAGAACGAGAACAAAAA
CAAGAACGGAGGAGGCACACGCAGCGTGGAGCAATATGAAAGAGGATTTGTGGAGTGTCTTGAGGAGATGGAGATTGAGATGGATTGTTTGAAGCCTTCATGTTTGGAAT
TTCTTTACAAGGACTGGGAAATTCAAACACTTATGCACGTTCAGCTTTTGTCCAACAAGTGCAAGTTGGATGCCAAGCTCACGGAATTGTGTATCCAATTTCTAAACACC
CCGACC
Protein sequenceShow/hide protein sequence
SSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKLKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSKEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDE
CNGLKFCGSGSEQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVECLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLLSNKCKLDAKLTELCIQFLNT
PT