; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018548 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018548
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold417:586424..586909
RNA-Seq ExpressionMS018548
SyntenyMS018548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]1.1e-1939.36Show/hide
Query:  ERKK-----RKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLDH----------------------
        ER+K      KKK  KS FEWS+  ++ LL+KLVEF+++NI  ++ YPFLR+GS LA +SK +IFD+IQ LK +YL++                      
Subjt:  ERKK-----RKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLDH----------------------

Query:  ---EAF----QLWTTQTESEGAA-------VVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY
           E F    QLW    E+E A+         R+ +E F ES GL + +  PSF + +KK +D +  L+ H  L KA L AQ+ QLKY
Subjt:  ---EAF----QLWTTQTESEGAA-------VVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY

KAG6575378.1 hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sororia]5.1e-0445.07Show/hide
Query:  QTESEGAAVVRSV-----FEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY
        +T+S  A+ +  V     FE  +E H L+LD+  PS ++  KK +DE+  LQ+ + LIKANL AQLAQLK+
Subjt:  QTESEGAAVVRSV-----FEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2442.05Show/hide
Query:  KKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLD-------------------HEAFQ----LW---
        ++K  K+ F+WSE  ++ LL KLVEF   N+  +Q YPFLR GS LA++ K +IFD+IQ LK ++L+                    E+F+    LW   
Subjt:  KKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLD-------------------HEAFQ----LW---

Query:  TTQTESEGAAVVR-------SVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKYH
          +TE++  +  +       S FE   E H L LD  TPSF++ +KK MDE+  LQ+HH LIKANL AQLAQLK+H
Subjt:  TTQTESEGAAVVR-------SVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKYH

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]8.1e-1032.95Show/hide
Query:  MKGGGGGGRDERKKRKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYL-----------------DH
        M+ G  G +      KKK  KS FEWS+  ++ LL+KLVEF+T+NI  ++ YPFLR+GS LA +S+T+IF++IQ LK +YL                 D 
Subjt:  MKGGGGGGRDERKKRKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYL-----------------DH

Query:  EAFQLWTTQTESEGAAVVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLK
        + F         EG  +   V+ +  E+    +  +     + +KK +D +  L+    L K+ L ++L +LK
Subjt:  EAFQLWTTQTESEGAAVVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLK

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein3.9e-1032.95Show/hide
Query:  MKGGGGGGRDERKKRKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYL-----------------DH
        M+ G  G +      KKK  KS FEWS+  ++ LL+KLVEF+T+NI  ++ YPFLR+GS LA +S+T+IF++IQ LK +YL                 D 
Subjt:  MKGGGGGGRDERKKRKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYL-----------------DH

Query:  EAFQLWTTQTESEGAAVVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLK
        + F         EG  +   V+ +  E+    +  +     + +KK +D +  L+    L K+ L ++L +LK
Subjt:  EAFQLWTTQTESEGAAVVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLK

A0A5A7UKP8 Uncharacterized protein5.5e-2039.36Show/hide
Query:  ERKK-----RKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLDH----------------------
        ER+K      KKK  KS FEWS+  ++ LL+KLVEF+++NI  ++ YPFLR+GS LA +SK +IFD+IQ LK +YL++                      
Subjt:  ERKK-----RKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLDH----------------------

Query:  ---EAF----QLWTTQTESEGAA-------VVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY
           E F    QLW    E+E A+         R+ +E F ES GL + +  PSF + +KK +D +  L+ H  L KA L AQ+ QLKY
Subjt:  ---EAF----QLWTTQTESEGAA-------VVRSVFEEFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCTAGGGCAATGAAAGGAGGAGGAGGAGGAGGAAGAGATGAGAGAAAAAAGAGGAAGAAAAAGGGCGGGAAGAGTGAGTTTGAATGGAGTGAGGCAGTGGATATGAT
TCTATTGAGAAAGTTGGTTGAGTTCCATACACAAAACATTCCCGATGACCAATTGTATCCGTTTCTGAGAGACGGGTCAGTGCTGGCGAACATCTCCAAGACTCGAATAT
TCGACAGGATTCAGCATCTCAAAATGCAATATTTGGATCATGAGGCTTTTCAGCTTTGGACTACTCAAACTGAATCTGAAGGAGCAGCAGTGGTGAGATCAGTTTTTGAG
GAGTTTGTTGAATCCCATGGCCTCCAACTAGATGTGTTGACGCCATCCTTTGTGGAGCAAAGCAAGAAGGCGATGGACGAAGTGCAGCGTCTTCAAAGCCACCACTGCTT
AATCAAAGCAAACTTGGACGCACAGCTTGCCCAACTCAAATACCAC
mRNA sequenceShow/hide mRNA sequence
GTGGCTAGGGCAATGAAAGGAGGAGGAGGAGGAGGAAGAGATGAGAGAAAAAAGAGGAAGAAAAAGGGCGGGAAGAGTGAGTTTGAATGGAGTGAGGCAGTGGATATGAT
TCTATTGAGAAAGTTGGTTGAGTTCCATACACAAAACATTCCCGATGACCAATTGTATCCGTTTCTGAGAGACGGGTCAGTGCTGGCGAACATCTCCAAGACTCGAATAT
TCGACAGGATTCAGCATCTCAAAATGCAATATTTGGATCATGAGGCTTTTCAGCTTTGGACTACTCAAACTGAATCTGAAGGAGCAGCAGTGGTGAGATCAGTTTTTGAG
GAGTTTGTTGAATCCCATGGCCTCCAACTAGATGTGTTGACGCCATCCTTTGTGGAGCAAAGCAAGAAGGCGATGGACGAAGTGCAGCGTCTTCAAAGCCACCACTGCTT
AATCAAAGCAAACTTGGACGCACAGCTTGCCCAACTCAAATACCAC
Protein sequenceShow/hide protein sequence
VARAMKGGGGGGRDERKKRKKKGGKSEFEWSEAVDMILLRKLVEFHTQNIPDDQLYPFLRDGSVLANISKTRIFDRIQHLKMQYLDHEAFQLWTTQTESEGAAVVRSVFE
EFVESHGLQLDVLTPSFVEQSKKAMDEVQRLQSHHCLIKANLDAQLAQLKYH