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MS018549 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018549
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold417:588955..589482
RNA-Seq ExpressionMS018549
SyntenyMS018549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607616.1 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1538.24Show/hide
Query:  NIEDLVIPDSYDDGEEFEECCYSNSKSPKRSLLRSCPRNWNYNIIINHEEEETRCNIENSNTEGDREKEKKEEEEDPIPIPIPSLEEENEEEEEASDKPK
        NIEDLV+ DSYD  EE E  CY   ++   +   S P         +H  + T     +      R ++++E+E++        LEEE  EEEEA    K
Subjt:  NIEDLVIPDSYDDGEEFEECCYSNSKSPKRSLLRSCPRNWNYNIIINHEEEETRCNIENSNTEGDREKEKKEEEEDPIPIPIPSLEEENEEEEEASDKPK

Query:  LYKAWFDAFLAEHGLHENYLD--KSSIEELHKTWVEAQLIGSELSLKEAEFDLNFIKFRYAICKHWISSL
         Y+ WF  F+++HGL   +LD   S ++EL K WV+ Q+  +++  KEAE D+N I  RYAICK W+SSL
Subjt:  LYKAWFDAFLAEHGLHENYLD--KSSIEELHKTWVEAQLIGSELSLKEAEFDLNFIKFRYAICKHWISSL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAATTATGTAATGTTAATATTGAAGACCTTGTGATTCCAGATTCGTACGACGATGGAGAAGAATTTGAAGAATGTTGTTATTCCAACTCTAAATCTCCTAA
GAGAAGTCTATTGAGATCCTGCCCAAGAAACTGGAATTATAACATTATTATTAACCATGAAGAAGAAGAAACAAGATGCAATATTGAGAATAGTAATACCGAGGGTGATC
GAGAGAAGGAGAAGAAAGAAGAAGAAGAAGATCCTATTCCTATTCCTATTCCTAGTTTAGAAGAAGAAAATGAAGAAGAAGAAGAAGCTTCTGATAAGCCCAAGTTGTAC
AAGGCATGGTTTGATGCATTTCTGGCTGAACATGGCCTCCATGAGAACTACTTGGACAAATCTTCCATTGAAGAGCTACACAAAACTTGGGTCGAAGCACAACTTATTGG
CAGCGAGTTGAGTTTGAAGGAGGCTGAATTTGATTTGAACTTCATCAAATTCAGATATGCTATTTGCAAACATTGGATTTCGTCTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAATTATGTAATGTTAATATTGAAGACCTTGTGATTCCAGATTCGTACGACGATGGAGAAGAATTTGAAGAATGTTGTTATTCCAACTCTAAATCTCCTAA
GAGAAGTCTATTGAGATCCTGCCCAAGAAACTGGAATTATAACATTATTATTAACCATGAAGAAGAAGAAACAAGATGCAATATTGAGAATAGTAATACCGAGGGTGATC
GAGAGAAGGAGAAGAAAGAAGAAGAAGAAGATCCTATTCCTATTCCTATTCCTAGTTTAGAAGAAGAAAATGAAGAAGAAGAAGAAGCTTCTGATAAGCCCAAGTTGTAC
AAGGCATGGTTTGATGCATTTCTGGCTGAACATGGCCTCCATGAGAACTACTTGGACAAATCTTCCATTGAAGAGCTACACAAAACTTGGGTCGAAGCACAACTTATTGG
CAGCGAGTTGAGTTTGAAGGAGGCTGAATTTGATTTGAACTTCATCAAATTCAGATATGCTATTTGCAAACATTGGATTTCGTCTTTG
Protein sequenceShow/hide protein sequence
MEEELCNVNIEDLVIPDSYDDGEEFEECCYSNSKSPKRSLLRSCPRNWNYNIIINHEEEETRCNIENSNTEGDREKEKKEEEEDPIPIPIPSLEEENEEEEEASDKPKLY
KAWFDAFLAEHGLHENYLDKSSIEELHKTWVEAQLIGSELSLKEAEFDLNFIKFRYAICKHWISSL