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MS018577 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018577
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold313:33661..34316
RNA-Seq ExpressionMS018577
SyntenyMS018577
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140323.1 uncharacterized protein LOC101218772 [Cucumis sativus]1.7e-2849.46Show/hide
Query:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL
        Q+++M+ H ++  +T P+K  VIITVYVESPK  N++         + N ++N    +       GYDRRAQLLAYSR LRN+ S        K KKWK 
Subjt:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL

Query:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        KVRSE                RYERVGM REER EVVDQ CRPKC   +S  KK+T +SGSSI  K+KSLL ELSKGCKR  +D
Subjt:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

XP_008460454.1 PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo]8.8e-3053.26Show/hide
Query:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL
        Q+++M+ H ++  +T P+K  VIITVYVESPK  N NSH+ +    N  N INPK          GYDRRAQLLAYSR LRN+ S        K KKWK 
Subjt:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL

Query:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        KVRSE                RYERVGM REER EVVDQ CRPKC   +S  KK+T +SGSSI  K+KSLL ELSKGCKR  +D
Subjt:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

XP_022141611.1 uncharacterized protein LOC111011926 [Momordica charantia]2.7e-7999.35Show/hide
Query:  QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG
        QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG
Subjt:  QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG

Query:  REERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        RE+RAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Subjt:  REERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

XP_023546181.1 uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo]1.0e-2551.88Show/hide
Query:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDS-----PLKPKKWKLKVRS-------------E
        K  P K+ VIITVYVESP K  N SHQN    + N+    +PK+ + RGYDRRA+LLAYSR+LRN+DS     P    KW++K  +             +
Subjt:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDS-----PLKPKKWKLKVRS-------------E

Query:  TRYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR
         RYERVGM REER EVV+QRC PK  CF    K+++G+ GSSIL K+KSL+  LSKGCKR
Subjt:  TRYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR

XP_038874461.1 uncharacterized protein LOC120067113 [Benincasa hispida]8.8e-3054.8Show/hide
Query:  NQKMEGHKSDTNKTNPRKDGVIITVYVESPK-SHNNSHQ-----NRDANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDSPL------KPKKWKLKVR
        +QKM+ H ++ N+T P+K GVIITVYVESPK   NNSH+     + + N  N   PK+    GYDRRAQLLAYSR LRN +S L      + KKWK +VR
Subjt:  NQKMEGHKSDTNKTNPRKDGVIITVYVESPK-SHNNSHQ-----NRDANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDSPL------KPKKWKLKVR

Query:  SET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR
        SE                RYERVGM REE  EVVDQ CRPKCF  +S +KK+T KSGSSI  K+KSLL ELS GCKR
Subjt:  SET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR

TrEMBL top hitse value%identityAlignment
A0A0A0KN34 Uncharacterized protein8.1e-2949.46Show/hide
Query:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL
        Q+++M+ H ++  +T P+K  VIITVYVESPK  N++         + N ++N    +       GYDRRAQLLAYSR LRN+ S        K KKWK 
Subjt:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL

Query:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        KVRSE                RYERVGM REER EVVDQ CRPKC   +S  KK+T +SGSSI  K+KSLL ELSKGCKR  +D
Subjt:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

A0A1S3CDS3 uncharacterized protein LOC1034992684.3e-3053.26Show/hide
Query:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL
        Q+++M+ H ++  +T P+K  VIITVYVESPK  N NSH+ +    N  N INPK          GYDRRAQLLAYSR LRN+ S        K KKWK 
Subjt:  QNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRGRGYDRRAQLLAYSRDLRNLDS------PLKPKKWKL

Query:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        KVRSE                RYERVGM REER EVVDQ CRPKC   +S  KK+T +SGSSI  K+KSLL ELSKGCKR  +D
Subjt:  KVRSET---------------RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

A0A6J1CJQ0 uncharacterized protein LOC1110119261.3e-7999.35Show/hide
Query:  QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG
        QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG
Subjt:  QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMG

Query:  REERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
        RE+RAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Subjt:  REERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD

A0A6J1HCQ4 uncharacterized protein LOC1114627893.2e-2553.12Show/hide
Query:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDSP---LKPKKWKLKVRSET--------------
        K  P K+ VIITVYVESP K  N SHQN    + N+    +PK+ + RGYDRRA+LLAYSR+LRN+DS    L   K K +V+SET              
Subjt:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYSRDLRNLDSP---LKPKKWKLKVRSET--------------

Query:  -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR
         RYERVGM REER EVV+QRC PK  CF    K+++G+ GSSIL K+KSL+  LS GCKR
Subjt:  -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR

A0A6J1JSH9 uncharacterized protein LOC1114871481.1e-2553.75Show/hide
Query:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPK-SRGRGYDRRAQLLAYSRDLRNLDSP---LKPKKWKLKVRSET--------------
        K  P K+ VIITVYVESP K  N SHQN    + N+     PK ++ RGYDRRA+LLAYSR+LRN+DS    L   K K +V+SET              
Subjt:  KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPK-SRGRGYDRRAQLLAYSRDLRNLDSP---LKPKKWKLKVRSET--------------

Query:  -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR
         RYERVGM REER EVV+QRC PK  CF    K+++G+ GSSIL K+KSL+  LSKGCKR
Subjt:  -RYERVGMGREERAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGCAAAATCAAAAGATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAA
TTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAA
ACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGAGAGAGCAGAGGTGGTGGATCAG
CGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAA
GGGGTGTAAACGCAGGAGTGATGAT
mRNA sequenceShow/hide mRNA sequence
CAGCAAAATCAAAAGATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAA
TTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAA
ACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGAGAGAGCAGAGGTGGTGGATCAG
CGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAA
GGGGTGTAAACGCAGGAGTGATGAT
Protein sequenceShow/hide protein sequence
QQNQKMEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREERAEVVDQ
RCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD