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MS018588 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018588
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFLZ-type domain-containing protein
Genome locationscaffold313:114759..115400
RNA-Seq ExpressionMS018588
SyntenyMS018588
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067408.1 protein MARD1-like [Cucumis melo var. makuwa]3.1e-4272.26Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT+S KEI+FDVGG   +  ++P     +S FD RLL+MLSPRNNRRHSDEFP S   LRA CLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ A+ASA +TV KVSAINGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

XP_004140318.1 FCS-Like Zinc finger 6 [Cucumis sativus]2.7e-4170.8Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT++ KEI+FD+GG   +  + P     +S FD RLL+MLSPRN RRHSDEFP S  +LRACCLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ AVASA + VAKVSA+NGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

XP_008460479.1 PREDICTED: protein MARD1-like [Cucumis melo]1.7e-4372.99Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT+S KEI+FDVGG   +  ++P     +S FD RLL+MLSPRNNRRHSDEFP S   LRACCLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ A+ASA +TV KVSAINGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

XP_022141577.1 uncharacterized protein LOC111011908 [Momordica charantia]2.5e-7199.29Show/hide
Query:  LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM
        LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM
Subjt:  LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM

Query:  NQDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        NQDEAKEKRLMAPK GAAAVASATSTVAKVSAINGETVAAV
Subjt:  NQDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

XP_038875391.1 FCS-Like Zinc finger 6-like [Benincasa hispida]6.3e-4371.74Show/hide
Query:  SINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQD
        SI RT+S K+I+FDVGG   +  E+P      +AF PRLL+MLSPRNNRRHSDEFP S  +LRACCLC RRL+ GRDIYMYKGESAFCSAECR QQMNQD
Subjt:  SINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQD

Query:  EAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        EAKEKR     KG+AAVASA + V KVSAINGETVAAV
Subjt:  EAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

TrEMBL top hitse value%identityAlignment
A0A0A0KRL1 FLZ-type domain-containing protein1.3e-4170.8Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT++ KEI+FD+GG   +  + P     +S FD RLL+MLSPRN RRHSDEFP S  +LRACCLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ AVASA + VAKVSA+NGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

A0A1S3CDU6 protein MARD1-like8.1e-4472.99Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT+S KEI+FDVGG   +  ++P     +S FD RLL+MLSPRNNRRHSDEFP S   LRACCLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ A+ASA +TV KVSAINGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

A0A5D3DT83 Protein MARD1-like1.5e-4272.26Show/hide
Query:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE
        I RT+S KEI+FDVGG   +  ++P     +S FD RLL+MLSPRNNRRHSDEFP S   LRA CLC RRL+ GRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  INRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        AKEK L A KKG+ A+ASA +TV KVSAINGETVAAV
Subjt:  AKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

A0A6J1CK72 uncharacterized protein LOC1110119081.2e-7199.29Show/hide
Query:  LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM
        LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM
Subjt:  LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQM

Query:  NQDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        NQDEAKEKRLMAPK GAAAVASATSTVAKVSAINGETVAAV
Subjt:  NQDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

A0A6J1JTL9 uncharacterized protein LOC1114874009.2e-4069.29Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMN
        R  I R+SS KEI+FDV        E PP E+PN+++D RLL+MLSPRNNRRHSDEFP S Q LRACCLC RRL+ GRDIYMYKGESAFCSAECRQQQMN
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMN

Query:  QDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        QDEAKEK     KKG     S  + V KVSAINGETVAAV
Subjt:  QDEAKEKRLMAPKKGAAAVASATSTVAKVSAINGETVAAV

SwissProt top hitse value%identityAlignment
F4JW68 FCS-Like Zinc finger 78.4e-1439.5Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEF--PRSP-QFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQ
        RP + RT+S+  I  +V G   A  +           +      LSP N++R+  ++    SP  FL  C  C R L PGRDIYMYKG++AFCS ECR+Q
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEF--PRSP-QFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQ

Query:  QMNQDEAKEKR--LMAPKK
        QM  DE K +   +++P K
Subjt:  QMNQDEAKEKR--LMAPKK

Q8VY80 FCS-Like Zinc finger 51.9e-2145.52Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENP-------------NSAFDPRLLAMLSPR-NNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGE
        RP I RT+SL EI FD+      P E  P ++                  D RLLAM+SPR   RRHS ++  S  FLR+C LC R L+ GRDIYMY+G+
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENP-------------NSAFDPRLLAMLSPR-NNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGE

Query:  SAFCSAECRQQQMNQDEAKEKRLMAPKKGAAAVASATSTVAKVSA
         AFCS ECRQQQ+  DE KEK+     +    VA+ T+T  +VSA
Subjt:  SAFCSAECRQQQMNQDEAKEKRLMAPKKGAAAVASATSTVAKVSA

Q8VZM9 FCS-Like Zinc finger 23.3e-1038.68Show/hide
Query:  SPRNNRRHSDEFPRS------PQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR------LMAPKKGAAAVASATSTVAKVSAIN
        SPR+ + H   F  S      P FL +C LC +RL   RDI+MY+G++ FCS ECR++Q+ +DEAKEK+      + A ++     +S++ T ++  A  
Subjt:  SPRNNRRHSDEFPRS------PQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR------LMAPKKGAAAVASATSTVAKVSAIN

Query:  GETVAA
          TVAA
Subjt:  GETVAA

Q9FH22 FCS-Like Zinc finger 152.1e-0958.7Show/hide
Query:  FLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR
        FL  C LC R+L+P +DIYMYKG+ AFCS ECR +QM  DE +  R
Subjt:  FLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR

Q9SGZ8 FCS-Like Zinc finger 61.2e-2345.12Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPP--PENPNSA--------------------FDPRLLAMLSPRNN-RRHSDEFPRSPQFLRACCLCHRRLIPG
        RP INRT+SL EI FD+      P E  P   + P  A                     D RLL+M++PR N RRHS +F  +  FLR+C LC R L+PG
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPP--PENPNSA--------------------FDPRLLAMLSPRNN-RRHSDEFPRSPQFLRACCLCHRRLIPG

Query:  RDIYMYKGESAFCSAECRQQQMNQDEAKEK-RLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        RDIYMY+G+ AFCS+ECRQ+QM QDE KEK +  AP K  A  A A +   K     G   AAV
Subjt:  RDIYMYKGESAFCSAECRQQQMNQDEAKEK-RLMAPKKGAAAVASATSTVAKVSAINGETVAAV

Arabidopsis top hitse value%identityAlignment
AT1G22160.1 Protein of unknown function (DUF581)1.3e-2245.52Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENP-------------NSAFDPRLLAMLSPR-NNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGE
        RP I RT+SL EI FD+      P E  P ++                  D RLLAM+SPR   RRHS ++  S  FLR+C LC R L+ GRDIYMY+G+
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENP-------------NSAFDPRLLAMLSPR-NNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGE

Query:  SAFCSAECRQQQMNQDEAKEKRLMAPKKGAAAVASATSTVAKVSA
         AFCS ECRQQQ+  DE KEK+     +    VA+ T+T  +VSA
Subjt:  SAFCSAECRQQQMNQDEAKEKRLMAPKKGAAAVASATSTVAKVSA

AT1G78020.1 Protein of unknown function (DUF581)8.3e-2545.12Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPP--PENPNSA--------------------FDPRLLAMLSPRNN-RRHSDEFPRSPQFLRACCLCHRRLIPG
        RP INRT+SL EI FD+      P E  P   + P  A                     D RLL+M++PR N RRHS +F  +  FLR+C LC R L+PG
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPP--PENPNSA--------------------FDPRLLAMLSPRNN-RRHSDEFPRSPQFLRACCLCHRRLIPG

Query:  RDIYMYKGESAFCSAECRQQQMNQDEAKEK-RLMAPKKGAAAVASATSTVAKVSAINGETVAAV
        RDIYMY+G+ AFCS+ECRQ+QM QDE KEK +  AP K  A  A A +   K     G   AAV
Subjt:  RDIYMYKGESAFCSAECRQQQMNQDEAKEK-RLMAPKKGAAAVASATSTVAKVSAINGETVAAV

AT4G17670.1 Protein of unknown function (DUF581)2.3e-1138.68Show/hide
Query:  SPRNNRRHSDEFPRS------PQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR------LMAPKKGAAAVASATSTVAKVSAIN
        SPR+ + H   F  S      P FL +C LC +RL   RDI+MY+G++ FCS ECR++Q+ +DEAKEK+      + A ++     +S++ T ++  A  
Subjt:  SPRNNRRHSDEFPRS------PQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR------LMAPKKGAAAVASATSTVAKVSAIN

Query:  GETVAA
          TVAA
Subjt:  GETVAA

AT4G39795.1 Protein of unknown function (DUF581)6.0e-1539.5Show/hide
Query:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEF--PRSP-QFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQ
        RP + RT+S+  I  +V G   A  +           +      LSP N++R+  ++    SP  FL  C  C R L PGRDIYMYKG++AFCS ECR+Q
Subjt:  RPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEF--PRSP-QFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQ

Query:  QMNQDEAKEKR--LMAPKK
        QM  DE K +   +++P K
Subjt:  QMNQDEAKEKR--LMAPKK

AT5G49120.1 Protein of unknown function (DUF581)1.5e-1058.7Show/hide
Query:  FLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR
        FL  C LC R+L+P +DIYMYKG+ AFCS ECR +QM  DE +  R
Subjt:  FLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCGCCCTTCAATCAACCGGACCTCCAGCCTCAAGGAGATCATCTTCGACGTCGGCGGCGGCGGCGGCGCTCCCGGAGAAGATCCGCCACCGGAAAACCCTAACTCCGC
CTTCGATCCACGGCTTTTGGCCATGCTCTCGCCGAGAAATAATCGGAGGCATTCCGATGAGTTTCCGCGGTCGCCTCAGTTCCTCCGAGCTTGCTGTCTCTGCCACCGCC
GCCTCATCCCCGGCCGAGACATATATATGTACAAGGGAGAAAGCGCGTTCTGTAGTGCAGAGTGCAGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAGAAGCGTTTG
ATGGCGCCGAAGAAAGGAGCCGCAGCGGTCGCATCAGCTACCTCCACCGTAGCAAAAGTCTCTGCGATTAATGGCGAGACTGTCGCCGCCGTG
mRNA sequenceShow/hide mRNA sequence
CTCCGCCCTTCAATCAACCGGACCTCCAGCCTCAAGGAGATCATCTTCGACGTCGGCGGCGGCGGCGGCGCTCCCGGAGAAGATCCGCCACCGGAAAACCCTAACTCCGC
CTTCGATCCACGGCTTTTGGCCATGCTCTCGCCGAGAAATAATCGGAGGCATTCCGATGAGTTTCCGCGGTCGCCTCAGTTCCTCCGAGCTTGCTGTCTCTGCCACCGCC
GCCTCATCCCCGGCCGAGACATATATATGTACAAGGGAGAAAGCGCGTTCTGTAGTGCAGAGTGCAGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAGAAGCGTTTG
ATGGCGCCGAAGAAAGGAGCCGCAGCGGTCGCATCAGCTACCTCCACCGTAGCAAAAGTCTCTGCGATTAATGGCGAGACTGTCGCCGCCGTG
Protein sequenceShow/hide protein sequence
LRPSINRTSSLKEIIFDVGGGGGAPGEDPPPENPNSAFDPRLLAMLSPRNNRRHSDEFPRSPQFLRACCLCHRRLIPGRDIYMYKGESAFCSAECRQQQMNQDEAKEKRL
MAPKKGAAAVASATSTVAKVSAINGETVAAV