CuGenDBv2

Gene ID	MS018594
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DFRP_C domain-containing protein
Genome location	scaffold313:187862..189772
RNA-Seq Expression	MS018594
Synteny	MS018594
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0005829 - cytosol (cellular component)
InterPro domains	IPR032378 - ZC3H15/TMA46 family, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]

4.3e-36

98.77

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE AAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]

1.8e-29

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AAME+EKL S NPRT PITE QFLSWKRQKDAEASAKRDETARKRA+DIA+GAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

XP_022963450.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]

1.3e-29

86.42

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  A +E+EKL+SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

XP_022990599.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]

7.9e-30

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AA+E+EKL SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

XP_038906768.1 zinc finger CCCH domain-containing protein 15 homolog [Benincasa hispida]

3.0e-29

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAE    A E+EK  SHNPRT PITEAQFLSWKRQKDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CCP9 zinc finger CCCH domain-containing protein 15 homolog isoform X2

2.5e-29

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MG EE  AAME+EKL+ +NPRT PITEAQFLSWKRQKDAEASAKRDETARKRAEDIA GAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog

2.1e-36

98.77

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE AAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog

8.5e-30

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AAME+EKL S NPRT PITE QFLSWKRQKDAEASAKRDETARKRA+DIA+GAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

A0A6J1HI11 zinc finger CCCH domain-containing protein 15 homolog

6.5e-30

86.42

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  A +E+EKL+SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog

3.8e-30

87.65

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Query:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AA+E+EKL SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22140.1 unknown protein

2.8e-17

66.13

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Query:  PRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY
        P    I++ QFL+WKRQKDAE  AK+ E ARKR EDIA+G V MNGRELFLH+PWVFD+T +
Subjt:  PRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

AT1G22140.2 unknown protein

6.5e-06

62.5

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Query:  PRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATG
        P    I++ QFL+WKRQKDAE  AK+ E ARKR EDIA+G
Subjt:  PRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATG

Sequences

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CDS sequence

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ATGGGGGCAGAAGAAACAGCAGCCGCTATGGAAAAAGAGAAGCTCACATCTCATAACCCAAGGACGAATCCCATCACGGAGGCTCAGTTCCTATCCTGGAAGCGGCAGAA
GGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCTAGGAAGCGTGCAGAGGATATAGCCACAGGAGCTGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCAT
GGGTTTTTGATAATACCCAATAT

mRNA sequence

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Protein sequence

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MGAEETAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGAVQMNGRELFLHQPWVFDNTQY

MS018594 (gene) of Bitter gourd (TR) v1 genome