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MS018598 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018598
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L30-like
Genome locationscaffold313:204983..205075
RNA-Seq ExpressionMS018598
SyntenyMS018598
Gene Ontology termsNA
InterPro domainsIPR022991 - Ribosomal protein L30e, conserved site
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9444949.1 hypothetical protein C3L33_23154, partial [Rhododendron williamsianum]2.0e-0589.29Show/hide
Query:  NVDLGTACGKYFRVSCLSIIDPGTTNMF
        NVDLGTACGKYFRVSCLSIIDPG T +F
Subjt:  NVDLGTACGKYFRVSCLSIIDPGTTNMF
KAF5746826.1 60S ribosomal protein L30-like [Tripterygium wilfordii]2.6e-0580.65Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNMF
        N  NVD+GTACGKYFRVSCLSIIDPGT   F
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNMF
NP_174853.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]4.4e-0576.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
XP_002285813.1 PREDICTED: putative 60S ribosomal protein L30-1 [Vitis vinifera]5.7e-0580Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSIIDPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
XP_022894750.1 60S ribosomal protein L30-like [Olea europaea var. sylvestris]5.7e-0580Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSIIDPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
TrEMBL top hitse value%identityAlignment
A0A2H5PXB3 Ribosomal_L7Ae domain-containing protein2.8e-0580Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSIIDPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
A0A6A4KPX2 Uncharacterized protein (Fragment)9.5e-0689.29Show/hide
Query:  NVDLGTACGKYFRVSCLSIIDPGTTNMF
        NVDLGTACGKYFRVSCLSIIDPG T +F
Subjt:  NVDLGTACGKYFRVSCLSIIDPGTTNMF
A0A7J7DL63 60S ribosomal protein L30-like1.2e-0580.65Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNMF
        N  NVD+GTACGKYFRVSCLSIIDPGT   F
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNMF
V4S1Y4 Ribosomal_L7Ae domain-containing protein2.8e-0580Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSIIDPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
V4S5A9 Ribosomal_L7Ae domain-containing protein2.8e-0580Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSIIDPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
SwissProt top hitse value%identityAlignment
O48558 60S ribosomal protein L304.9e-0781.48Show/hide
Query:  NVDLGTACGKYFRVSCLSIIDPGTTNM
        NVDLGTACGKYFRV CLSIIDPG +++
Subjt:  NVDLGTACGKYFRVSCLSIIDPGTTNM
Q8VZ19 60S ribosomal protein L30-29.8e-0876.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
Q9C8F7 Putative 60S ribosomal protein L30-15.7e-0876.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
Q9LSA3 60S ribosomal protein L30-39.8e-0876.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
Q9SDG6 60S ribosomal protein L304.9e-0781.48Show/hide
Query:  NVDLGTACGKYFRVSCLSIIDPGTTNM
        NVDLGTACGKYFRV CLSIIDPG +++
Subjt:  NVDLGTACGKYFRVSCLSIIDPGTTNM
Arabidopsis top hitse value%identityAlignment
AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.1e-0976.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
AT1G77940.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein7.0e-0976.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
AT3G18740.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein7.0e-0976.67Show/hide
Query:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM
        N  NVDLGTACGKYFRVSCLSI+DPG +++
Subjt:  NLGNVDLGTACGKYFRVSCLSIIDPGTTNM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTTAGGCAATGTTGATCTTGGAACCGCTTGTGGCAAGTATTTCCGCGTGTCATGCCTCAGCATTATTGACCCAGGTACTACAAATATGTTT
mRNA sequenceShow/hide mRNA sequence
AATTTAGGCAATGTTGATCTTGGAACCGCTTGTGGCAAGTATTTCCGCGTGTCATGCCTCAGCATTATTGACCCAGGTACTACAAATATGTTT
Protein sequenceShow/hide protein sequence
NLGNVDLGTACGKYFRVSCLSIIDPGTTNMF