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MS018599 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018599
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRicin B-type lectin domain-containing protein
Genome locationscaffold313:207759..208160
RNA-Seq ExpressionMS018599
SyntenyMS018599
Gene Ontology termsNA
InterPro domainsIPR021410 - The fantastic four family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141391.1 uncharacterized protein LOC111011804, partial [Momordica charantia]4.0e-71100Show/hide
Query:  SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY
        SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY
Subjt:  SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY

Query:  FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
        FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
Subjt:  FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED

XP_022990518.1 uncharacterized protein LOC111487372 [Cucurbita maxima]3.2e-3666.41Show/hide
Query:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR
        +R+ DIDDYIGMESCVDL+EN TAAD          + KR+NKM G   +   EYPPPI LLVRTENLAS MPWVLKR YT DGRLILT+E++RH+E+FR
Subjt:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR

Query:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED
        AHRSDGRLMLQLVA DD G  ES  +  DED
Subjt:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED

XP_022992861.1 uncharacterized protein LOC111489066 [Cucurbita maxima]1.1e-3663.77Show/hide
Query:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR
        SS   +DI  DDYIG+ESCVDLK + TAAD  P    P   + KR+NK  W G  + ++ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILTEEKV+
Subjt:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR

Query:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
        HHE+FRAHRSDGRLMLQLV +DD + +   D+E+E+E+
Subjt:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED

XP_023525339.1 uncharacterized protein LOC111788943 [Cucurbita pepo subsp. pepo]8.4e-3765.65Show/hide
Query:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR
        +R+ DIDDYIG+ESCVDL EN TAAD          + KR+NKMWG   +   EYPPPI LLVRTENLAS MPWVLKRHYT DGRL+LTEE++R++E+FR
Subjt:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR

Query:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED
        AHRS+GRLMLQLVA DD G  ES  +  DED
Subjt:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED

XP_023551237.1 uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]1.4e-3664.96Show/hide
Query:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR
        SS   SDI  DDYIG+ESCVDLK++ TA DT P    P   + KR+ K  W G  + ++ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILTEEKV+
Subjt:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR

Query:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDE
        HHE+FRAHRSDGRLMLQLV +DD D +   D+E E+E
Subjt:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDE

TrEMBL top hitse value%identityAlignment
A0A6J1CJ12 uncharacterized protein LOC1110118041.9e-71100Show/hide
Query:  SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY
        SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY
Subjt:  SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEY

Query:  FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
        FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
Subjt:  FRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED

A0A6J1FP95 uncharacterized protein LOC1114456725.9e-3663.04Show/hide
Query:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR
        SS   SDI  DDYIG+ESCVDLK+N TAAD  P    P   + KR+ K  W G  + ++ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLILTEEKV+
Subjt:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR

Query:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
        HHE+FRAHRSDGRLMLQLV +DD + +   D+E++ E+
Subjt:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED

A0A6J1GVY4 uncharacterized protein LOC1114580316.5e-3562.6Show/hide
Query:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR
        +R+ D DDYIG+ESCVDL EN T++D          + +R+NKMWG   +   EYPPPI LLVRTENLAS MPWVLKRHYT DGRLILTEE++R++E+FR
Subjt:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR

Query:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED
        AHRS+GRLMLQLVA DD G  ES  +   ED
Subjt:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED

A0A6J1JTI2 uncharacterized protein LOC1114873721.5e-3666.41Show/hide
Query:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR
        +R+ DIDDYIGMESCVDL+EN TAAD          + KR+NKM G   +   EYPPPI LLVRTENLAS MPWVLKR YT DGRLILT+E++RH+E+FR
Subjt:  TRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFR

Query:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED
        AHRSDGRLMLQLVA DD G  ES  +  DED
Subjt:  AHRSDGRLMLQLVALDD-GDGESGQDQEDED

A0A6J1JUP6 uncharacterized protein LOC1114890665.3e-3763.77Show/hide
Query:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR
        SS   +DI  DDYIG+ESCVDLK + TAAD  P    P   + KR+NK  W G  + ++ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILTEEKV+
Subjt:  SSTRESDI--DDYIGMESCVDLKENQTAADTMPPPP-PMKFSDKRENK-MWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVR

Query:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED
        HHE+FRAHRSDGRLMLQLV +DD + +   D+E+E+E+
Subjt:  HHEYFRAHRSDGRLMLQLVALDDGDGESGQDQEDEDED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22110.1 structural constituent of ribosome3.8e-2748.99Show/hide
Query:  SSTRESDIDDYIGMESCVDL---KENQTAADTMPPPPPMKFSDKRENKMWGGTGRKE--------REYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLI
        SS+  S + DYIG ESC D+    E          P   +F        +GG  R+E        RE+PPPIPLL +T NL  HMPWVLKR  T DGRLI
Subjt:  SSTRESDIDDYIGMESCVDL---KENQTAADTMPPPPPMKFSDKRENKMWGGTGRKE--------REYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLI

Query:  LTEEKVRHHEYFRAHRSDGRLMLQLVALDDGDGESGQD----QEDEDED
        L EEKVRHHEYFRA+RS+GRL L LV LDD   +  Q+    Q D++ED
Subjt:  LTEEKVRHHEYFRAHRSDGRLMLQLVALDDGDGESGQD----QEDEDED

AT1G77932.1 Protein of unknown function (DUF3049)7.1e-1846.85Show/hide
Query:  YIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSDGRL
        YIG ESC +   ++T    +P        ++RE K    T  +E   PP +P         SH+P VLKR YT DGRL+L EEKV  +EYFRAHRS+GRL
Subjt:  YIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSDGRL

Query:  MLQLVALDDGD
        M+QLV+LD+ D
Subjt:  MLQLVALDDGD

AT5G22390.1 Protein of unknown function (DUF3049)1.2e-0427.13Show/hide
Query:  IGMESCVDLKENQTAADTMPPPPPMKFSDK----RENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSD
        +G ES   L++ +   D       ++   K     + + W    ++ +EYPP              M  +  + Y  +GRL+L E ++   E+ RA R D
Subjt:  IGMESCVDLKENQTAADTMPPPPPMKFSDK----RENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSD

Query:  GRLMLQLVALDDGDGESGQDQEDE--DED
        GRL L+LV  +D   E  ++++D+  DED
Subjt:  GRLMLQLVALDDGDGESGQDQEDE--DED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAGTACTCGAGAGTCCGATATTGATGATTACATTGGCATGGAGAGTTGTGTTGATTTGAAAGAGAATCAGACGGCGGCCGACACGATGCCACCGCCGCCGCCGATGAA
ATTCTCCGATAAGAGGGAGAATAAAATGTGGGGGGGAACGGGGAGGAAGGAGAGGGAGTATCCTCCGCCGATCCCATTGCTGGTTCGCACCGAGAATCTGGCTTCCCACA
TGCCGTGGGTGTTGAAACGGCATTACACAGGCGACGGGCGGCTGATACTGACGGAGGAGAAAGTGAGGCACCACGAATACTTCCGGGCCCACAGATCCGACGGCCGTCTG
ATGCTGCAGCTGGTGGCCCTCGACGACGGCGACGGCGAATCCGGGCAAGATCAGGAGGATGAGGATGAGGAT
mRNA sequenceShow/hide mRNA sequence
TCCAGTACTCGAGAGTCCGATATTGATGATTACATTGGCATGGAGAGTTGTGTTGATTTGAAAGAGAATCAGACGGCGGCCGACACGATGCCACCGCCGCCGCCGATGAA
ATTCTCCGATAAGAGGGAGAATAAAATGTGGGGGGGAACGGGGAGGAAGGAGAGGGAGTATCCTCCGCCGATCCCATTGCTGGTTCGCACCGAGAATCTGGCTTCCCACA
TGCCGTGGGTGTTGAAACGGCATTACACAGGCGACGGGCGGCTGATACTGACGGAGGAGAAAGTGAGGCACCACGAATACTTCCGGGCCCACAGATCCGACGGCCGTCTG
ATGCTGCAGCTGGTGGCCCTCGACGACGGCGACGGCGAATCCGGGCAAGATCAGGAGGATGAGGATGAGGAT
Protein sequenceShow/hide protein sequence
SSTRESDIDDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTGRKEREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSDGRL
MLQLVALDDGDGESGQDQEDEDED