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MS018604 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018604
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncentromere protein V-like
Genome locationscaffold313:257000..257398
RNA-Seq ExpressionMS018604
SyntenyMS018604
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]1.1e-5274.8Show/hide
Query:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS
        MG +D   MVVHSGGCHCKRIRW++EA +SV AW+CNCS+CSMRGNTHF+V    F LLG+S  ++S+Y+FGTHTAKHTFC+VCGITSFYHSRSTPDGVS
Subjt:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS

Query:  VTFRCVDPGTLAHVKILKFDGTNWEAA
        V+FRCVDPGTL HV+I+KFDG NWE A
Subjt:  VTFRCVDPGTLAHVKILKFDGTNWEAA

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5480.67Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        MV+H GGCHCKRIRW++EA ASVTAWECNCSDC MRGNTHF+V   +F+LLG+S+K+VS+Y+FGTH A HTFC+VCGITSFYHSRSTPDGVSVTFRCVDP
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAA
        GTLAHV+I KFDG NWEAA
Subjt:  GTLAHVKILKFDGTNWEAA

XP_022946627.1 centromere protein V-like [Cucurbita moschata]1.3e-5067.46Show/hide
Query:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC
        D  +VVH+GGCHCK +RW++EAP SV AW+CNCSDC MR NTHF V  ++F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYH RS PDGV++TF+C
Subjt:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC

Query:  VDPGTLAHVKILKFDGTNWEAAAAAT
        VDPGTL HV+I +FDG+NWEA+   T
Subjt:  VDPGTLAHVKILKFDGTNWEAAAAAT

XP_022999779.1 centromere protein V-like [Cucurbita maxima]4.6e-5168.25Show/hide
Query:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC
        D  +VVH+GGCHCK++RW++EAPASV AW+CNCSDC MR NTHF V  ++F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYH RS PDGV++TF+C
Subjt:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC

Query:  VDPGTLAHVKILKFDGTNWEAAAAAT
        VDPGTLA+V+I +FDG+NWEA+   T
Subjt:  VDPGTLAHVKILKFDGTNWEAAAAAT

XP_023546052.1 centromere protein V [Cucurbita pepo subsp. pepo]7.8e-5167.46Show/hide
Query:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC
        D  +V H+GGCHCK++RW++EAPASV AW+CNCSDC MR NTHF V  ++F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYH RS PDGV++TF+C
Subjt:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC

Query:  VDPGTLAHVKILKFDGTNWEAAAAAT
        VDPGTL HV+I +FDG+NWEA+   T
Subjt:  VDPGTLAHVKILKFDGTNWEAAAAAT

TrEMBL top hitse value%identityAlignment
A0A0A0KN47 CENP-V/GFA domain-containing protein2.1e-5475.59Show/hide
Query:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS
        MG +D+  MVVHSGGCHCKRIRW++EA +SV AW+CNCS+CSMRGNTHF+V    F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYHSRSTPDGVS
Subjt:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS

Query:  VTFRCVDPGTLAHVKILKFDGTNWEAA
        V+FRCVDPGTL HV+I+KFDGTNWE A
Subjt:  VTFRCVDPGTLAHVKILKFDGTNWEAA

A0A5A7V607 Centromere protein V isoform X55.3e-5374.8Show/hide
Query:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS
        MG +D   MVVHSGGCHCKRIRW++EA +SV AW+CNCS+CSMRGNTHF+V    F LLG+S  ++S+Y+FGTHTAKHTFC+VCGITSFYHSRSTPDGVS
Subjt:  MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVS

Query:  VTFRCVDPGTLAHVKILKFDGTNWEAA
        V+FRCVDPGTL HV+I+KFDG NWE A
Subjt:  VTFRCVDPGTLAHVKILKFDGTNWEAA

A0A6J1G4E1 centromere protein V-like6.4e-5167.46Show/hide
Query:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC
        D  +VVH+GGCHCK +RW++EAP SV AW+CNCSDC MR NTHF V  ++F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYH RS PDGV++TF+C
Subjt:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC

Query:  VDPGTLAHVKILKFDGTNWEAAAAAT
        VDPGTL HV+I +FDG+NWEA+   T
Subjt:  VDPGTLAHVKILKFDGTNWEAAAAAT

A0A6J1KE30 centromere protein V-like2.2e-5168.25Show/hide
Query:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC
        D  +VVH+GGCHCK++RW++EAPASV AW+CNCSDC MR NTHF V  ++F+LLG+S+ ++S+Y+FGTHTAKHTFC+VCGITSFYH RS PDGV++TF+C
Subjt:  DEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRC

Query:  VDPGTLAHVKILKFDGTNWEAAAAAT
        VDPGTLA+V+I +FDG+NWEA+   T
Subjt:  VDPGTLAHVKILKFDGTNWEAAAAAT

W9RKQ0 Centromere protein V3.2e-5067.48Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V+HSGGCHC++++W+++AP SV AW+C+CSDC+MRGNTHF V   +FQLLG+SE++V++Y+FG+HTAKHTFC+VCGITSFY  RS PDGVSVTFRCVDP
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAAT
        GTL HV++ +FDG NWE++ A T
Subjt:  GTLAHVKILKFDGTNWEAAAAAT

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 11.0e-1636.8Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H+GGCHC  +R+ + APA +   +C+C  C  + + HF V   +F LL  +E  V +Y   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAATQH
        GT+  V I +  G +     AA +H
Subjt:  GTLAHVKILKFDGTNWEAAAAATQH

A0A0U1RRI6 Centromere protein V-like protein 31.0e-1636.8Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H+GGCHC  +R+ + APA +   +C+C  C  + + HF V   +F LL  +E  V +Y   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAATQH
        GT+  V I +  G +     AA +H
Subjt:  GTLAHVKILKFDGTNWEAAAAATQH

P0DPI3 Centromere protein V-like protein 21.0e-1636.8Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H+GGCHC  +R+ + APA +   +C+C  C  + + HF V   +F LL  +E  V +Y   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAATQH
        GT+  V I +  G +     AA +H
Subjt:  GTLAHVKILKFDGTNWEAAAAATQH

Q7Z7K6 Centromere protein V3.1e-2642.02Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H+GGCHC  +R+++ A A +  ++CNCS C  + N HF V   +F+LL  +E ++++Y+F TH A+HTFC+ CG+ SFY  RS P G  +   C+D 
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAA
        GT+  +   +F+G++WE A
Subjt:  GTLAHVKILKFDGTNWEAA

Q9CXS4 Centromere protein V1.8e-2642.86Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H+GGCHC  +R+++ A A +  ++CNCS C  + N HF V   +F+LL  +E  +++Y+F TH A+HTFC+ CG+ SFY  RS P G  +   C+D 
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAA
        GT+  V   +F+G++WE A
Subjt:  GTLAHVKILKFDGTNWEAA

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases4.0e-4558.54Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        ++ H GGCHC +I+W+++A  SV AW CNCSDCSMRGN HF V    F+LL +S+ ++++Y+FGTHTAKHTFC+VCGITSFY  RS PDGV+VT +CV  
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAAT
        GTLAH+++  +DG NWE +   T
Subjt:  GTLAHVKILKFDGTNWEAAAAAT

AT5G16940.2 carbon-sulfur lyases4.0e-4558.54Show/hide
Query:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP
        ++ H GGCHC +I+W+++A  SV AW CNCSDCSMRGN HF V    F+LL +S+ ++++Y+FGTHTAKHTFC+VCGITSFY  RS PDGV+VT +CV  
Subjt:  MVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVKILKFDGTNWEAAAAAT
        GTLAH+++  +DG NWE +   T
Subjt:  GTLAHVKILKFDGTNWEAAAAAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTCAGATGATGAGATAATGGTGGTGCACAGTGGTGGGTGCCACTGCAAGAGAATAAGATGGAAAATGGAAGCACCGGCGAGCGTCACAGCCTGGGAATGCAA
CTGTTCAGACTGCTCCATGAGGGGCAATACACATTTCAGCGTGGCTTGCGACAAATTCCAGCTCTTGGGAGAGTCTGAGAAGTATGTTTCGAGCTACAGCTTTGGGACTC
ACACTGCCAAACACACCTTCTGCAGAGTGTGTGGGATCACCTCGTTTTACCATTCACGGTCAACCCCAGATGGGGTTTCGGTCACTTTCAGATGCGTTGATCCTGGAACT
CTGGCCCATGTGAAGATTCTCAAGTTTGATGGCACAAATTGGGAGGCAGCTGCAGCTGCAACTCAGCAC
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTCAGATGATGAGATAATGGTGGTGCACAGTGGTGGGTGCCACTGCAAGAGAATAAGATGGAAAATGGAAGCACCGGCGAGCGTCACAGCCTGGGAATGCAA
CTGTTCAGACTGCTCCATGAGGGGCAATACACATTTCAGCGTGGCTTGCGACAAATTCCAGCTCTTGGGAGAGTCTGAGAAGTATGTTTCGAGCTACAGCTTTGGGACTC
ACACTGCCAAACACACCTTCTGCAGAGTGTGTGGGATCACCTCGTTTTACCATTCACGGTCAACCCCAGATGGGGTTTCGGTCACTTTCAGATGCGTTGATCCTGGAACT
CTGGCCCATGTGAAGATTCTCAAGTTTGATGGCACAAATTGGGAGGCAGCTGCAGCTGCAACTCAGCAC
Protein sequenceShow/hide protein sequence
MGSSDDEIMVVHSGGCHCKRIRWKMEAPASVTAWECNCSDCSMRGNTHFSVACDKFQLLGESEKYVSSYSFGTHTAKHTFCRVCGITSFYHSRSTPDGVSVTFRCVDPGT
LAHVKILKFDGTNWEAAAAATQH