CuGenDBv2

Gene ID	MS018605
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rx_N domain-containing protein
Genome location	scaffold313:259321..259836
RNA-Seq Expression	MS018605
Synteny	MS018605
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602042.1 hypothetical protein SDJN03_07275, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-57

69.14

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS SLNPFPDRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI       QDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISRR+SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK   FWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

KAG7032736.1 hypothetical protein SDJN02_06786, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-56

68.57

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS SLNPFPDRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI       QDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISRR+SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK   FWRR S+MCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

XP_022959523.1 uncharacterized protein LOC111460520 [Cucurbita moschata]

2.7e-56

68.57

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS S N FPDRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI    T  QDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISRR+SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK   FWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

XP_022990803.1 uncharacterized protein LOC111487585 [Cucurbita maxima]

9.4e-57

69.14

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS S NPF DRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI    T IQDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISR +SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK  GFWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

XP_023541987.1 uncharacterized protein LOC111801939 [Cucurbita pepo subsp. pepo]

2.5e-57

69.14

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS S NPFPDRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI       QDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISRR+SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK  GFWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTL9 Uncharacterized protein

4.4e-52

65.57

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI-----TTLIQDNSQTPNPH-NSLLDAY
        MP PS+SLNPFPDRK P PT+     DDLAAVKAAAWAW+ HGSGSE+KPMREFGLTR   +PKPSRYRL A      T LIQD  QTP PH NSLLD+Y
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI-----TTLIQDNSQTPNPH-NSLLDAY

Query:  EIQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSSV--RRPTRR
        EI SISRRLSDLLDP DRNNFSLRSF+SEI+D   Q+E  K TK  K  G W    R+PS+MCGK EDV + +    RRP  R
Subjt:  EIQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSSV--RRPTRR

A0A1S4E2U9 uncharacterized protein LOC103499304

5.4e-50

63.74

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Query:  MPLPSVSLNPFPDRKKPAPTDG----DDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI----TTLIQDNSQTPNPH-NSLLDAYE
        MP PS SLNPFPDR KP PT+     D+LAAVKAAAWAW+ HGSGSE+KPMREFGLTR   +PKPSRYRL A     +  I+DN QTP+P+ NSLLD+YE
Subjt:  MPLPSVSLNPFPDRKKPAPTDG----DDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI----TTLIQDNSQTPNPH-NSLLDAYE

Query:  IQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSS--VRRPTRR
        I SISRRLSDLLDP DRNNFSLRSF+SEI+D   Q+E  K TK  K  G W    R+PS+MCGK EDV + +    RRP  R
Subjt:  IQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSS--VRRPTRR

A0A5D3DS63 Uncharacterized protein

5.4e-50

63.74

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Query:  MPLPSVSLNPFPDRKKPAPTDG----DDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI----TTLIQDNSQTPNPH-NSLLDAYE
        MP PS SLNPFPDR KP PT+     D+LAAVKAAAWAW+ HGSGSE+KPMREFGLTR   +PKPSRYRL A     +  I+DN QTP+P+ NSLLD+YE
Subjt:  MPLPSVSLNPFPDRKKPAPTDG----DDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI----TTLIQDNSQTPNPH-NSLLDAYE

Query:  IQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSS--VRRPTRR
        I SISRRLSDLLDP DRNNFSLRSF+SEI+D   Q+E  K TK  K  G W    R+PS+MCGK EDV + +    RRP  R
Subjt:  IQSISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFW----RRPSVMCGKTEDVDVGSS--VRRPTRR

A0A6J1H668 uncharacterized protein LOC111460520

1.3e-56

68.57

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS S N FPDRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI    T  QDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISRR+SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK   FWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

A0A6J1JUC6 uncharacterized protein LOC111487585

4.6e-57

69.14

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Query:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ
        MPLPS S NPF DRK P PT      DDLAA KAAAWAW+HHGSGSE+KPMREFGLTR   +PKPSRYRL AI    T IQDNSQTP  HNSLLD+YE+ 
Subjt:  MPLPSVSLNPFPDRKKPAPTD----GDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAI---TTLIQDNSQTPNPHNSLLDAYEIQ

Query:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR
        SISR +SDLLDP DRNNFSLRSF+SEILD   ++E +K TK KK  GFWRR SVMCGK EDV +GS VR P +++
Subjt:  SISRRLSDLLDPADRNNFSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G66190.1 unknown protein

1.9e-10

39.42

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Query:  GDDLAAVKAAAWAWFHHGSGSEAKP-MREFGLTRTTILPKPSRYRLHAITTLIQDN---------SQTPNP---------------HNSLLDAYEIQSIS
        GDDLA VKAAAWAW+      E KP MREF +TR   +P+PSRY++ A   +I            S T +P               ++ LLD YE ++IS
Subjt:  GDDLAAVKAAAWAWFHHGSGSEAKP-MREFGLTRTTILPKPSRYRLHAITTLIQDN---------SQTPNP---------------HNSLLDAYEIQSIS

Query:  RRLS
        +RL+
Subjt:  RRLS

AT5G37550.1 unknown protein

2.7e-17

35.26

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Query:  DDLAAVKAAAWAWFHHGSGSEAKP-MREFGLTRTTI-LPKPSRYRLHAITTLIQDNSQTPNPH-------------NSLLDAYEIQSISRRLSD-LLDPA
        D+LA VKAAAWAW+      E KP MREF L++  I  P+PSRY+L A  T+I   ++   PH             +SLLD+YEI+SIS+R+ +  L   
Subjt:  DDLAAVKAAAWAWFHHGSGSEAKP-MREFGLTRTTI-LPKPSRYRLHAITTLIQDNSQTPNPH-------------NSLLDAYEIQSISRRLSD-LLDPA

Query:  DRNNFSLRSFDSEILDPEPQVESKKK---TKHKKLRGFWR-----RPSVMCGKTEDVDVGSSVRRPTRRRSPA
           N   + +D  +L  + + +SK++    K   +R  W+      P  +CG+++DVD+G+  R   R +  A
Subjt:  DRNNFSLRSFDSEILDPEPQVESKKK---TKHKKLRGFWR-----RPSVMCGKTEDVDVGSSVRRPTRRRSPA

Sequences

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CDS sequence

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ATGCCATTGCCATCCGTCTCCCTCAACCCTTTCCCCGACCGCAAGAAGCCCGCCCCCACCGACGGCGACGACTTAGCGGCGGTGAAGGCGGCGGCGTGGGCTTGGTTCCA
CCATGGATCAGGCTCCGAAGCCAAGCCCATGCGCGAATTCGGCCTCACCAGGACCACCATTCTCCCCAAGCCCTCCCGCTACAGGCTCCACGCAATCACGACTCTCATTC
AGGACAATTCACAAACACCTAATCCGCACAACTCCCTCCTCGACGCCTACGAGATCCAGAGCATTTCTCGCCGCTTATCTGACCTTCTAGACCCTGCTGATCGCAATAAT
TTCAGCCTCAGGAGCTTCGATTCGGAAATATTGGACCCAGAACCACAAGTTGAGAGCAAGAAGAAGACGAAGCATAAGAAATTGAGAGGTTTCTGGCGGAGGCCCTCGGT
GATGTGCGGCAAAACAGAGGATGTGGATGTTGGCAGTTCCGTCCGGCGGCCGACGCGACGCCGCAGCCCAGCCCAT

mRNA sequence

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Protein sequence

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MPLPSVSLNPFPDRKKPAPTDGDDLAAVKAAAWAWFHHGSGSEAKPMREFGLTRTTILPKPSRYRLHAITTLIQDNSQTPNPHNSLLDAYEIQSISRRLSDLLDPADRNN
FSLRSFDSEILDPEPQVESKKKTKHKKLRGFWRRPSVMCGKTEDVDVGSSVRRPTRRRSPAH

MS018605 (gene) of Bitter gourd (TR) v1 genome