CuGenDBv2

Gene ID	MS018617
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	sodium/calcium exchanger NCL
Genome location	scaffold313:463902..464132
RNA-Seq Expression	MS018617
Synteny	MS018617
Gene Ontology terms	GO:0006874 - cellular calcium ion homeostasis (biological process) GO:0070588 - calcium ion transmembrane transport (biological process) GO:0005774 - vacuolar membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0015369 - calcium:proton antiporter activity (molecular function)
InterPro domains	IPR004713 - Calcium/proton exchanger IPR004837 - Sodium/calcium exchanger membrane region

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6591925.1 Sodium/calcium exchanger NCL, partial [Cucurbita argyrosperma subsp. sororia]

9.1e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

XP_022139616.1 sodium/calcium exchanger NCL [Momordica charantia]

1.8e-28

98.7

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

XP_022937179.1 sodium/calcium exchanger NCL-like [Cucurbita moschata]

9.1e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

XP_022976461.1 sodium/calcium exchanger NCL-like [Cucurbita maxima]

9.1e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

XP_023536443.1 sodium/calcium exchanger NCL-like [Cucurbita pepo subsp. pepo]

9.1e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VFE4 Sodium/calcium exchanger family protein

2.2e-27

94.81

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+AT IPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

A0A6J1CD77 sodium/calcium exchanger NCL

8.9e-29

98.7

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

A0A6J1FAG1 sodium/calcium exchanger NCL-like

4.4e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

A0A6J1IGZ1 sodium/calcium exchanger NCL-like

4.4e-28

96.1

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+ATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

E5GBG6 Sodium/calcium exchanger family protein

2.2e-27

94.81

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        VLIKAILFL+LGTAIAAAFADPLVDVVHNFS+AT IPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

SwissProt top hits

e value

%identity

Alignment

Q5QNI2 Sodium/calcium exchanger NCL1

1.9e-23

78.95

Show/hide

Query:  LIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        + KA+  L+LG+AIAAAFADPLVD VHNFS+A++IP+FFISFIALPLATNSSEAVSAIIFASR K +T+SLTFSEV
Subjt:  LIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

Q6K3R5 Sodium/calcium exchanger NCL2

3.7e-24

81.33

Show/hide

Query:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        IKAIL L+LGTA+AAA ADPLVD VHNFS+AT+IP+FFISFI +PLATNSSEAVSAIIFASR K++T SLTFSEV
Subjt:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

Q8L636 Sodium/calcium exchanger NCL

1.1e-23

80.52

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        + IKA L L+LG AIAAAFADPLVD V+NFS+AT IP+FFISFIALPLATNSSEAVSAIIFASR K +TASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

Arabidopsis top hits

e value

%identity

Alignment

AT1G29020.1 Calcium-binding EF-hand family protein

1.5e-04

Show/hide

Query:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        ++A L ++LG  +    A P +  +   S +  +P+F++ F+ +PLA N    +SA     +DK K  S TFSE+
Subjt:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

AT1G29025.1 Calcium-binding EF-hand family protein

1.2e-04

Show/hide

Query:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        +KA++ +++G  I +  A P +  +   S +  +P+F++ F  +PLA N   A+SA     ++K K  S TFSE+
Subjt:  IKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein

7.7e-25

80.52

Show/hide

Query:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV
        + IKA L L+LG AIAAAFADPLVD V+NFS+AT IP+FFISFIALPLATNSSEAVSAIIFASR K +TASLTFSE+
Subjt:  VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GTGTTGATCAAAGCTATACTCTTCTTGATGCTTGGAACTGCCATTGCTGCTGCCTTTGCTGACCCTTTGGTTGACGTCGTACACAACTTCTCTAGTGCAACTAACATCCC
TGCGTTCTTTATTTCGTTTATCGCTCTGCCATTAGCAACCAACTCCAGTGAAGCAGTCTCTGCTATAATCTTTGCAAGTCGTGACAAACGCAAAACCGCCTCCTTAACAT
TTTCAGAGGTT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

VLIKAILFLMLGTAIAAAFADPLVDVVHNFSSATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSEV

MS018617 (gene) of Bitter gourd (TR) v1 genome