CuGenDBv2

Gene ID	MS018621
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Voltage-dependent L-type calcium channel subunit
Genome location	scaffold313:508895..511196
RNA-Seq Expression	MS018621
Synteny	MS018621
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602021.1 hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-86

81.61

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E YDSDDRNG V VEE+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGP+V +ACRN+GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAAT NAI+ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AAGWIGFFCVVWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQS+SA SSAISAFS+ARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

XP_004140295.1 uncharacterized protein LOC101212066 [Cucumis sativus]

2.5e-86

82.96

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E +DSDDRN  V VEEED  S+ SKGV +EDQTVYEPLRRLIAEIFFPDE KG SLFHRVK+SV +NGPAV QACRN GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTI LLA+TG LIFL FFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AAGWIGFFC+VWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        K+S+SAS+SAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

XP_022141354.1 uncharacterized protein LOC111011773 [Momordica charantia]

7.5e-107

99.55

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVA GWIGFFCVVWLAVRRSFGFA
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQSLSASSSAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

XP_023514904.1 uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]

6.6e-87

82.06

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E YDSDDRNG V VEE+D  S+ SKGV + DQTVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AAGWIGFFCVVWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQS+SA SSAISAFS+ARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

XP_038906498.1 uncharacterized protein LOC120092475 [Benincasa hispida]

3.5e-88

84.3

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E YDSDDRN    VEEED  S+ SKGVR ED TVYEPLRRLI EIFFPDE KG+SLF RVK+SVAENGPAVGQACRN GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTI LLALTG LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+YIGAL VA+FVISTAT SAIV V++AAGW+GFFCVVWLAVR+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        K+S++AS+SAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNC3 Uncharacterized protein

1.2e-86

82.96

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E +DSDDRN  V VEEED  S+ SKGV +EDQTVYEPLRRLIAEIFFPDE KG SLFHRVK+SV +NGPAV QACRN GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTI LLA+TG LIFL FFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AAGWIGFFC+VWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        K+S+SAS+SAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

A0A5A7V6K3 Uncharacterized protein

9.7e-84

81.61

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E +DSD RN  V VEEED  S+ SKG+  +DQTVYEPLRRLIAEIFFPDE KG SLFHRVK+SVA+NGPAVGQACRN G DVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTI LLA+TG LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+Y+GAL VA+FVISTAT SAIVAV++AAGWIGFF +VWLA+ +SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        K+S+SAS+SAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

A0A6J1CIE7 uncharacterized protein LOC111011773

3.6e-107

99.55

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVA GWIGFFCVVWLAVRRSFGFA
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQSLSASSSAISAFSYARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

A0A6J1E7P4 uncharacterized protein LOC111430635

3.5e-86

81.17

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E YDSDDRNG V V+E+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AAGWIGFFCVVWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQS+SA SSAISAFS+ARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

A0A6J1JJZ4 uncharacterized protein LOC111487608

4.6e-86

80.72

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Query:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI
        M E YDSDDRNG V V+E++  S+ SKG+ SEDQTVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGPAV +ACRN+G DVL WTRRGSPLRALLVI
Subjt:  MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA
        SVGTIALLALTGLLIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++AAGWIGFFCVVWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFA

Query:  KQSLSASSSAISAFSYARRAHKD
        KQS+SA SS ISAFS+ARRAHKD
Subjt:  KQSLSASSSAISAFSYARRAHKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16550.1 unknown protein

2.1e-46

53.28

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Query:  MGEPYDSDDRNG---AVTVEEEDGVSYSSKGVRSED-QTVYEPLRRLIAEIFFPDEFKG--TSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPL
        +GE  +   +NG     +VE+ED           ED +++Y  +   I  I FPD   G  +S   RV+ SVAENGP + +A    GR++L WTRRGS L
Subjt:  MGEPYDSDDRNG---AVTVEEEDGVSYSSKGVRSED-QTVYEPLRRLIAEIFFPDEFKG--TSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPL

Query:  RALLVISVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVR
        RALLVI++GTI LL    L++F LFF+AAT NAIIISLL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT SA+V+VL+A+GWIGFF  VWL  R
Subjt:  RALLVISVGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVR

Query:  RSFGFAKQSLSASSSAISAFSYARRAHKD
         S   AKQS+S   SAIS  + +R  H+D
Subjt:  RSFGFAKQSLSASSSAISAFSYARRAHKD

Sequences

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CDS sequence

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ATGGGCGAGCCGTACGACTCCGATGACCGGAATGGCGCCGTGACGGTTGAGGAAGAAGATGGAGTCAGTTACAGTTCCAAAGGAGTGCGCAGTGAGGATCAGACCGTCTA
CGAGCCTCTCCGCCGTCTGATCGCTGAGATTTTCTTCCCCGATGAATTTAAGGGCACTTCTCTGTTTCACCGTGTTAAGCTTTCCGTCGCCGAGAATGGTCCGGCCGTTG
GCCAGGCTTGCAGAAACGTAGGTCGCGATGTTCTTCGCTGGACTCGCAGGGGCAGTCCTCTTCGAGCTCTCCTTGTTATCTCCGTTGGGACTATTGCTCTTCTTGCATTG
ACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTCTGAATGCCATTATCATTTCTCTTCTCGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCTCTTTTCTT
TGCCTGTGTAACGGCTGTATACATCGGAGCCTTAACAGTTGCTGTGTTTGTTATATCCACTGCAACATTCTCTGCAATTGTAGCAGTGTTGGTTGCCGCAGGTTGGATTG
GGTTCTTCTGTGTGGTTTGGCTGGCAGTACGGAGAAGTTTTGGCTTTGCTAAGCAGTCATTGAGCGCAAGCAGTTCAGCAATTTCGGCATTTTCTTATGCTAGGCGTGCT
CACAAAGAC

mRNA sequence

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Protein sequence

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MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFHRVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVISVGTIALLAL
TGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAVYIGALTVAVFVISTATFSAIVAVLVAAGWIGFFCVVWLAVRRSFGFAKQSLSASSSAISAFSYARRA
HKD

MS018621 (gene) of Bitter gourd (TR) v1 genome