; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018654 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018654
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionpsbQ-like protein 3, chloroplastic
Genome locationscaffold313:770950..771574
RNA-Seq ExpressionMS018654
SyntenyMS018654
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141571.1 psbQ-like protein 3, chloroplastic [Momordica charantia]5.0e-9399.45Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE
        MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENT+ISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE

Query:  SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
Subjt:  SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

XP_022962345.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]4.3e-6071.66Show/hide
Query:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAEALLE
        MAEL+PIS+ +L +R +F SSSP + S + F+I A   +   +ISRR+GLGL + L  S +V +     ANALDLKLIAP QSFEEAESGIRGHAEA+L+
Subjt:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAEALLE

Query:  VRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        VRGLIESE+WKEAQK+LR+SSP LKQDL+TIIEYKPPAERPPLRKLYSLLFNN+TRMDYAARD+DAERV +CY NIVMAISDILSRI
Subjt:  VRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]3.8e-6473.51Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVR
        MAEL+PIS+ +L +R +FSSSP ++SF+ F+I A   +   +ISRR+GLG + L  + S+A   V   NALDLKLIAP QSFEEAESGIRGHAEA+L+VR
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVR

Query:  GLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        GLIESE+WKEAQK+LRSSSP LKQDL+TIIEYKPPAERPPLRKLYSLLFNN+TRMDYAARD+DAERVW+CY NIVMAISDILSRI
Subjt:  GLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]5.4e-6371.73Show/hide
Query:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAA----NCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAE
        MAEL+PIS+ +L +R +F SSSP ++S + F+I A    NC + + +ISRR+GLGL + L  S +V +     ANALDLKLIAP QSFEEAESGIRGHAE
Subjt:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAA----NCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAE

Query:  ALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        A+L+VRGLIESE+WKEAQK+LRSSSP LKQDL+TIIEYKPPAERPPLR+LYSLLFNN+TRMDYAARD+DAERVW+CY NIVMAISDILSRI
Subjt:  ALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

XP_038877067.1 psbQ-like protein 3, chloroplastic [Benincasa hispida]1.9e-6071.2Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG
        MAEL PIS+ +L +R  FSS    +SF+SFN   NCS   TNISRR+GLG    +  S+    V  ANALDLKLIAP QS +EAESGIR HAEALL+VR 
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG

Query:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        LIESEAWKEAQKRLRSSSP LKQDL+TIIEYKPPAERP LRKLYS+LFNN+TRMDYAARD+D E VW+CY NI +AISDILSRI
Subjt:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

TrEMBL top hitse value%identityAlignment
A0A0A0KT23 Uncharacterized protein6.7e-5971.2Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMAVGA--ANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG
        MA+L PISL +L +R +FS SP  +SF SFN   NCSN  TNISRR+GLG + L  +   A+ A  ANALDLKLIAP QS +EAESGIR HAEALL+VR 
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMAVGA--ANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG

Query:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        LIESEAWKEAQKRLRS+S  LKQDL+TIIEYKPPAERP LRKLYSLLFNN+TRMDYAARD+D   VWE Y  + MAISDILSRI
Subjt:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

A0A5A7VLN5 PsbQ-like protein 35.7e-5870.11Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMAVGA--ANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG
        MA+L PISL +L +R +FSSSP  +SF+SFN   NCS    NISRR+GLG + L  +   A+ A  ANAL+LKLIAP QS +EAE GIRGHAEALL+VR 
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMAVGA--ANALDLKLIAPGQSFEEAESGIRGHAEALLEVRG

Query:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        L+ESEAWKEAQKRLRS+S  LKQDL+TIIEYKPPAERP LRKLYSLLFNN+TRMDYAARD+DA  V ECY  + MAISDILSRI
Subjt:  LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

A0A6J1CJL2 psbQ-like protein 3, chloroplastic2.4e-9399.45Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE
        MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENT+ISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIE

Query:  SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
Subjt:  SEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X12.1e-6071.66Show/hide
Query:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAEALLE
        MAEL+PIS+ +L +R +F SSSP + S + F+I A   +   +ISRR+GLGL + L  S +V +     ANALDLKLIAP QSFEEAESGIRGHAEA+L+
Subjt:  MAELNPISLPSLCSRTNF-SSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGA-----ANALDLKLIAPGQSFEEAESGIRGHAEALLE

Query:  VRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        VRGLIESE+WKEAQK+LR+SSP LKQDL+TIIEYKPPAERPPLRKLYSLLFNN+TRMDYAARD+DAERV +CY NIVMAISDILSRI
Subjt:  VRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X11.8e-6473.51Show/hide
Query:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVR
        MAEL+PIS+ +L +R +FSSSP ++SF+ F+I A   +   +ISRR+GLG + L  + S+A   V   NALDLKLIAP QSFEEAESGIRGHAEA+L+VR
Subjt:  MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLG-LGLGLTGSMA---VGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVR

Query:  GLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        GLIESE+WKEAQK+LRSSSP LKQDL+TIIEYKPPAERPPLRKLYSLLFNN+TRMDYAARD+DAERVW+CY NIVMAISDILSRI
Subjt:  GLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

SwissProt top hitse value%identityAlignment
Q2V4B2 PsbQ-like protein 3, chloroplastic9.1e-2148.62Show/hide
Query:  PGQSFEEAESGIRGHAEALLEVRG-LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVM
        P ++ E A+ G+R +AE +  ++  +IE + WKE  K LR S+  +KQD + II+ KPP +RP  R LYS LFN+IT+MDYAARD D  +V E Y NIV 
Subjt:  PGQSFEEAESGIRGHAEALLEVRG-LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

Q41048 Oxygen-evolving enhancer protein 3-1, chloroplastic2.6e-0727.21Show/hide
Query:  GLTGSMAVGAANALDLKL--------IAPGQSFEEAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLF
        GL G++    A   DL L        + P     EA + ++  A+ ++ ++ LI+ +AW   Q  LR  +  L+ DL T+I  KP  E+  L++L   LF
Subjt:  GLTGSMAVGAANALDLKL--------IAPGQSFEEAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLF

Query:  NNITRMDYAARDRDAERVWECYGNIVMAISDILSRI
        + I  +D+AA+ +      + +     A+ D+L+++
Subjt:  NNITRMDYAARDRDAERVWECYGNIVMAISDILSRI

Q41806 Oxygen-evolving enhancer protein 3-2, chloroplastic2.6e-0728.43Show/hide
Query:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS
        EA + ++  A+ ++ ++ LI+ +AW   Q  LR  +  L+ DL T+I  KP  E+  L++L   LF+ I  +D+AA+ +      + +     A+ D+L+
Subjt:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS

Query:  RI
        ++
Subjt:  RI

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic1.5e-1033.33Show/hide
Query:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS
        EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ DL+TII  KP  E+  L+ L + LF+ I  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS

Query:  RI
        ++
Subjt:  RI

Arabidopsis top hitse value%identityAlignment
AT2G01918.1 PsbQ-like 36.5e-2248.62Show/hide
Query:  PGQSFEEAESGIRGHAEALLEVRG-LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVM
        P ++ E A+ G+R +AE +  ++  +IE + WKE  K LR S+  +KQD + II+ KPP +RP  R LYS LFN+IT+MDYAARD D  +V E Y NIV 
Subjt:  PGQSFEEAESGIRGHAEALLEVRG-LIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

AT4G21280.1 photosystem II subunit QA1.0e-1133.33Show/hide
Query:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS
        EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ DL+TII  KP  E+  L+ L + LF+ I  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS

Query:  RI
        ++
Subjt:  RI

AT4G21280.2 photosystem II subunit QA1.0e-1133.33Show/hide
Query:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS
        EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ DL+TII  KP  E+  L+ L + LF+ I  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLEVRGLIESEAWKEAQKRLRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILS

Query:  RI
        ++
Subjt:  RI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATTGAACCCAATCTCACTCCCAAGCCTCTGTAGCCGCACCAACTTCTCTTCCTCTCCCGCTGTCGTCTCCTTCCGATCGTTCAATATCGCCGCCAATTGTTC
TAACGAGAACACAAACATCAGCAGAAGAATAGGGTTAGGATTAGGGCTGGGATTGACAGGTTCAATGGCGGTGGGAGCGGCAAATGCTTTGGATCTGAAATTGATCGCGC
CGGGCCAGAGCTTCGAGGAGGCGGAGAGCGGAATCAGAGGCCACGCGGAGGCGCTTTTGGAGGTGAGAGGTTTGATTGAATCGGAGGCTTGGAAGGAGGCTCAGAAGAGG
TTGAGAAGCAGTTCGCCGCCGCTGAAACAGGATCTACATACTATAATTGAATACAAACCGCCGGCTGAGAGGCCTCCTCTAAGGAAACTTTACTCTCTTCTCTTCAACAA
TATTACACGAATGGATTATGCAGCGAGAGACAGAGATGCAGAACGAGTTTGGGAATGCTACGGTAACATTGTGATGGCCATTTCTGACATTTTGTCCAGAATT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATTGAACCCAATCTCACTCCCAAGCCTCTGTAGCCGCACCAACTTCTCTTCCTCTCCCGCTGTCGTCTCCTTCCGATCGTTCAATATCGCCGCCAATTGTTC
TAACGAGAACACAAACATCAGCAGAAGAATAGGGTTAGGATTAGGGCTGGGATTGACAGGTTCAATGGCGGTGGGAGCGGCAAATGCTTTGGATCTGAAATTGATCGCGC
CGGGCCAGAGCTTCGAGGAGGCGGAGAGCGGAATCAGAGGCCACGCGGAGGCGCTTTTGGAGGTGAGAGGTTTGATTGAATCGGAGGCTTGGAAGGAGGCTCAGAAGAGG
TTGAGAAGCAGTTCGCCGCCGCTGAAACAGGATCTACATACTATAATTGAATACAAACCGCCGGCTGAGAGGCCTCCTCTAAGGAAACTTTACTCTCTTCTCTTCAACAA
TATTACACGAATGGATTATGCAGCGAGAGACAGAGATGCAGAACGAGTTTGGGAATGCTACGGTAACATTGTGATGGCCATTTCTGACATTTTGTCCAGAATT
Protein sequenceShow/hide protein sequence
MAELNPISLPSLCSRTNFSSSPAVVSFRSFNIAANCSNENTNISRRIGLGLGLGLTGSMAVGAANALDLKLIAPGQSFEEAESGIRGHAEALLEVRGLIESEAWKEAQKR
LRSSSPPLKQDLHTIIEYKPPAERPPLRKLYSLLFNNITRMDYAARDRDAERVWECYGNIVMAISDILSRI