CuGenDBv2

Gene ID	MS018658
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transcription initiation factor TFIID subunit 11-like
Genome location	scaffold313:802087..802686
RNA-Seq Expression	MS018658
Synteny	MS018658
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022141363.1 prothymosin alpha-B [Momordica charantia]

8.6e-94

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Query:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE
        MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE
Subjt:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE

Query:  EDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA
         DEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPL EVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA
Subjt:  EDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA

XP_022939215.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata]

3.4e-58

73.66

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Query:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED
        MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ D+ ID+ S AAEGK DG + A VDAG+  +++DDE+D E+
Subjt:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED

Query:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDS
              E+     A EDRKGKGI+KDDKGKGKLIEE DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGN+DDDS
Subjt:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

XP_022992871.1 nucleolin-like [Cucurbita maxima]

1.5e-58

74.27

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Query:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED
        MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ DE ID  S AAEGK DG   A VDAG      ++ EDY D
Subjt:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED

Query:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD
        E+D E+ E+ + +A +DRKGKGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGN+DDD
Subjt:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD

Query:  SSDSDA
        SSDSDA
Subjt:  SSDSDA

XP_023551083.1 nucleolin-like [Cucurbita pepo subsp. pepo]

5.8e-58

73.3

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Query:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED
        MAET +SREET FD KRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ DE ID+ S AAEGK DG + A VDAG+  +++DDE+D E+
Subjt:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED

Query:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD
              E+     A EDRKGKGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGN+DDD
Subjt:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD

Query:  SSDSDA
        SSDSDA
Subjt:  SSDSDA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]

1.7e-57

74.88

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Query:  MAETTSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVKKS-ENGD-HKRSDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEED
        MAETT+ EE  FDAKRKP DPCCEAKEE SNK+QKLEVV+ +ESC+DVKK+ ENGD HK +DE ID+  S  AEGK  DG VGA +DAG      D+ ED
Subjt:  MAETTSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVKKS-ENGD-HKRSDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEED

Query:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDD
         EDE+D E+ E+ + +A EDRKGKGI+KDDKGKGKLIEE DDDDDEDSSD GSEL SEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFA DLGNDDD
Subjt:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDD

Query:  DSSDSDA
        DSSDSDA
Subjt:  DSSDSDA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMR8 Uncharacterized protein

5.0e-55

71.5

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Query:  MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDV-KKSENGDHKRSDEHIDDDS---LAAEGKDGEVGAGVDAGEADDEEDDEED
        MAE T+R EE  FDAKRKP D C + KEE SNKIQKLEVV+ +ESC+ V   +ENGDHK SDE +D+ S   L  +G DG  GA +DAG      D+EED
Subjt:  MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDV-KKSENGDHKRSDEHIDDDS---LAAEGKDGEVGAGVDAGEADDEEDDEED

Query:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDD
        YEDE+D ED+E+ +++  EDRKGKGI+KDDKGKGKLIEE DDDDDEDSSD GS+L SEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGNDDD
Subjt:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDD

Query:  DSSDSDA
        DSSDSDA
Subjt:  DSSDSDA

A0A1S3CIW7 acidic repeat-containing protein

1.6e-53

71.63

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Query:  MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVK-KSENGDHKRSDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEED
        MAE T+R EE  FDAKRKP D C + KEE SNKIQKLEVV+ +ESC+ VK  +ENGDHK SDE ID+  S   EGK  DG  GA +DAG      D+EED
Subjt:  MAETTSR-EETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVK-DESCHDVK-KSENGDHKRSDEHIDD-DSLAAEGK--DGEVGAGVDAGEADDEEDDEED

Query:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDD
        YEDE+D ED+E+ + +   DRKGKGI+KDDKGKGKLIEE DDDDDDEDSSD GS+L SEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFA DL NDD
Subjt:  YEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDD

Query:  DDSSDSDA
        DDSSDSDA
Subjt:  DDSSDSDA

A0A6J1CKB5 prothymosin alpha-B

4.1e-94

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Query:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE
        MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE
Subjt:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDE

Query:  EDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA
         DEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPL EVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA
Subjt:  EDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA

A0A6J1FM23 prostatic spermine-binding protein isoform X2

1.6e-58

73.66

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Query:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED
        MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ D+ ID+ S AAEGK DG + A VDAG+  +++DDE+D E+
Subjt:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED

Query:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDS
              E+     A EDRKGKGI+KDDKGKGKLIEE DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGN+DDDS
Subjt:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE-DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

A0A6J1K0H1 nucleolin-like

7.4e-59

74.27

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Query:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED
        MAET +SREET FDAKRKP DPCCEAKEE SNKIQKLEVV+ E C+DVKK+ +NGDHK+ DE ID  S AAEGK DG   A VDAG      ++ EDY D
Subjt:  MAET-TSREETTFDAKRKP-DPCCEAKEEHSNKIQKLEVVKDESCHDVKKS-ENGDHKRSDEHIDDDSLAAEGK-DGEVGAGVDAGEADDEEDDEEDYED

Query:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD
        E+D E+ E+ + +A +DRKGKGI+KDDKGKGKLIEE  DDDDDDEDSSD GSE  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFA DLGN+DDD
Subjt:  ENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEE--DDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDD

Query:  SSDSDA
        SSDSDA
Subjt:  SSDSDA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12830.1 unknown protein

5.3e-25

45.87

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Query:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSE-NGD------HKRSDEHID-DDSLAAEGKDGEVGAGV--DAGEADDEEDD
        MA+  ++++++F  KRK D  C+ ++  +NK QKL    + +  + K  E NG       +  ++E I  + S+ +E    EV +GV  D G A++E++D
Subjt:  MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSE-NGD------HKRSDEHID-DDSLAAEGKDGEVGAGV--DAGEADDEEDD

Query:  EEDYEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELG---SEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKD
        EED E+E+DEE+EEE   E V DRKGKGI ++DKGKGK+IE ++ DD++DS D   + G    +ESD SDDPLAEVDLDNILPSRTRRR+  PGV+   +
Subjt:  EEDYEDENDEEDEEEDASEAVEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELG---SEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKD

Query:  LGN-----DDDDSSDSDA
          N     +DD+SSDSDA
Subjt:  LGN-----DDDDSSDSDA

Sequences

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CDS sequence

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ATGGCGGAAACTACCAGTAGAGAGGAGACCACATTTGACGCCAAGCGTAAACCTGACCCCTGCTGCGAAGCAAAAGAGGAGCATTCGAACAAAATTCAAAAGCTCGAAGT
GGTTAAGGACGAATCTTGCCATGATGTGAAGAAAAGTGAGAATGGAGACCATAAGCGGAGTGATGAACACATTGATGACGATTCTTTGGCTGCCGAAGGGAAAGACGGTG
AAGTTGGAGCTGGTGTAGATGCGGGAGAAGCAGATGACGAGGAAGACGATGAGGAAGATTACGAGGATGAGAATGACGAAGAGGACGAAGAGGAAGACGCCAGTGAAGCA
GTCGAGGATCGTAAGGGGAAGGGCATCGTGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGAAGATTCCAGTGACGGTGGAAGCGA
GTTGGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTCGCGGAGGTCGATTTGGACAATATCCTTCCTTCAAGGACGCGGAGGCGGACGGTTCATCCTGGAGTTTATT
TTGCTAAAGATCTGGGGAACGATGACGATGATAGCAGTGATAGCGATGCT

mRNA sequence

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Protein sequence

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MAETTSREETTFDAKRKPDPCCEAKEEHSNKIQKLEVVKDESCHDVKKSENGDHKRSDEHIDDDSLAAEGKDGEVGAGVDAGEADDEEDDEEDYEDENDEEDEEEDASEA
VEDRKGKGIVKDDKGKGKLIEEDDDDDDEDSSDGGSELGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFAKDLGNDDDDSSDSDA

MS018658 (gene) of Bitter gourd (TR) v1 genome