; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018668 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018668
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprefoldin 5
Genome locationscaffold313:911807..912908
RNA-Seq ExpressionMS018668
SyntenyMS018668
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin
IPR011599 - Prefoldin alpha subunit, archaea-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141646.1 probable prefoldin subunit 5 [Momordica charantia]3.3e-62100Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

XP_022938455.1 probable prefoldin subunit 5 [Cucurbita moschata]1.1e-4979.39Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A KEQ D+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLL+SN+DQL+E+
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

XP_022958568.1 probable prefoldin subunit 5 [Cucurbita moschata]5.9e-5181.68Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A+KEQTD+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLLKSN+DQL+EV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

XP_023513364.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]7.7e-5181.68Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G    E  RS ELEKMSV+QL+A+KEQTD+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLLKSN+DQL+EV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

XP_023549859.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]2.2e-5080.15Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A KEQTD+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLL+SN+DQL+E+
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

TrEMBL top hitse value%identityAlignment
A0A5D2RKP5 Uncharacterized protein7.8e-4977.86Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MAS RG GS +  RS ++EKMS+DQL+A+KEQ D+EVNLL +SLNNIRTA+ RL+ AFAALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVD+GTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YFVEKTMAEGKDYC+RKI LLKSN+DQL+EV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

A0A6J1CJU6 probable prefoldin subunit 51.6e-62100Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

A0A6J1FD74 probable prefoldin subunit 55.4e-5079.39Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A KEQ D+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLL+SN+DQL+E+
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

A0A6J1H3F5 probable prefoldin subunit 52.9e-5181.68Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A+KEQTD+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLLKSN+DQL+EV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

A0A6J1JP08 probable prefoldin subunit 52.9e-5181.68Show/hide
Query:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG
        MASR+G  + E  RS ELEKMSV+QL+A+KEQTD+EVNLLH+SLNNIRTA++RLD A AALHDLSLRPQGK+MLVPLTASLYV G LDDA+KVLVDVGTG
Subjt:  MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTG

Query:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV
        YF+EKTMAEGKDYCDRKIKLLKSN+DQL+EV
Subjt:  YFVEKTMAEGKDYCDRKIKLLKSNYDQLVEV

SwissProt top hitse value%identityAlignment
P57742 Probable prefoldin subunit 51.7e-4575.41Show/hide
Query:  SEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAE
        + +S   E+EKM +DQL+ALKEQ DLEVNLL +SLNNIRTA+ RLDAA AAL+DLSLRPQGK+MLVPLTASLYV G LD+A+KVLVD+GTGYF+EKTM +
Subjt:  SEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAE

Query:  GKDYCDRKIKLLKSNYDQLVEV
        GKDYC RKI LLKSN+DQL EV
Subjt:  GKDYCDRKIKLLKSNYDQLVEV

Q5RAY0 Prefoldin subunit 51.5e-1739.17Show/hide
Query:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD
        ++S  + ++++ QL  LK Q D EV  L  S+  ++   T+   A   L+ L+   +GK++LVPLT+S+YV G+L D   VL+DVGTGY+VEKT  + KD
Subjt:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD

Query:  YCDRKIKLLKSNYDQLVEVL
        +  RKI  L    +++   L
Subjt:  YCDRKIKLLKSNYDQLVEVL

Q8HYI9 Prefoldin subunit 51.5e-1739.17Show/hide
Query:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD
        ++S  + ++++ QL  LK Q D EV  L  S+  ++   T+   A   L+ L    +GK++LVPLT+S+YV G+L D   VL+DVGTGY+VEKT  + KD
Subjt:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD

Query:  YCDRKIKLLKSNYDQLVEVL
        +  RKI  L    +++   L
Subjt:  YCDRKIKLLKSNYDQLVEVL

Q99471 Prefoldin subunit 51.5e-1739.17Show/hide
Query:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD
        ++S  + ++++ QL  LK Q D EV  L  S+  ++   T+   A   L+ L+   +GK++LVPLT+S+YV G+L D   VL+DVGTGY+VEKT  + KD
Subjt:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD

Query:  YCDRKIKLLKSNYDQLVEVL
        +  RKI  L    +++   L
Subjt:  YCDRKIKLLKSNYDQLVEVL

Q9WU28 Prefoldin subunit 51.5e-1739.17Show/hide
Query:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD
        ++S  + ++++ QL  LK Q D EV  L  S+  ++   T+   A   L+ L+   +GK++LVPLT+S+YV G+L D   VL+DVGTGY+VEKT  + KD
Subjt:  SRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEGKD

Query:  YCDRKIKLLKSNYDQLVEVL
        +  RKI  L    +++   L
Subjt:  YCDRKIKLLKSNYDQLVEVL

Arabidopsis top hitse value%identityAlignment
AT5G23290.1 prefoldin 51.2e-4675.41Show/hide
Query:  SEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAE
        + +S   E+EKM +DQL+ALKEQ DLEVNLL +SLNNIRTA+ RLDAA AAL+DLSLRPQGK+MLVPLTASLYV G LD+A+KVLVD+GTGYF+EKTM +
Subjt:  SEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAE

Query:  GKDYCDRKIKLLKSNYDQLVEV
        GKDYC RKI LLKSN+DQL EV
Subjt:  GKDYCDRKIKLLKSNYDQLVEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGGAGAGGAGCGGGCAGCAGCGAAGCGTCGCGGTCGTCGGAGTTGGAGAAGATGAGTGTGGATCAACTCAGAGCCCTCAAGGAACAGACCGATCTCGAAGT
CAATCTCCTTCACGAGAGCCTCAACAACATTCGCACCGCCTCTACTCGCCTCGACGCTGCCTTCGCTGCCCTTCACGACCTCTCCCTCCGTCCACAAGGCAAGCAGATGT
TGGTGCCTCTTACGGCGTCGCTTTATGTTGCTGGTAGGCTCGATGATGCCAATAAGGTCTTGGTGGATGTCGGCACTGGATACTTCGTTGAGAAAACGATGGCAGAAGGA
AAGGATTATTGTGATCGTAAGATCAAATTGCTGAAGTCGAATTATGATCAACTAGTCGAGGTATTG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGAGGAGAGGAGCGGGCAGCAGCGAAGCGTCGCGGTCGTCGGAGTTGGAGAAGATGAGTGTGGATCAACTCAGAGCCCTCAAGGAACAGACCGATCTCGAAGT
CAATCTCCTTCACGAGAGCCTCAACAACATTCGCACCGCCTCTACTCGCCTCGACGCTGCCTTCGCTGCCCTTCACGACCTCTCCCTCCGTCCACAAGGCAAGCAGATGT
TGGTGCCTCTTACGGCGTCGCTTTATGTTGCTGGTAGGCTCGATGATGCCAATAAGGTCTTGGTGGATGTCGGCACTGGATACTTCGTTGAGAAAACGATGGCAGAAGGA
AAGGATTATTGTGATCGTAAGATCAAATTGCTGAAGTCGAATTATGATCAACTAGTCGAGGTATTG
Protein sequenceShow/hide protein sequence
MASRRGAGSSEASRSSELEKMSVDQLRALKEQTDLEVNLLHESLNNIRTASTRLDAAFAALHDLSLRPQGKQMLVPLTASLYVAGRLDDANKVLVDVGTGYFVEKTMAEG
KDYCDRKIKLLKSNYDQLVEVL