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MS018677 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018677
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalumenin-like
Genome locationscaffold313:977399..977530
RNA-Seq ExpressionMS018677
SyntenyMS018677
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637521.1 hypothetical protein CSA_004542 [Cucumis sativus]2.3e-1597.73Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
KAE8648373.1 hypothetical protein Csa_023160 [Cucumis sativus]2.3e-1597.73Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
XP_008465196.1 PREDICTED: calumenin-B-like [Cucumis melo]6.6e-1595.45Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
XP_031742276.1 LOW QUALITY PROTEIN: calumenin-B [Cucumis sativus]2.3e-1597.73Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
XP_038876256.1 calumenin-like [Benincasa hispida]6.6e-1595.45Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
TrEMBL top hitse value%identityAlignment
A0A1S3CNB9 calumenin-B-like3.2e-1595.45Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
A0A5D3CVB0 Calumenin-B-like3.2e-1595.45Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
A0A6J1CJ22 calumenin-like4.2e-1593.18Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        + QADADKDGRLTLAEMIDHPYVFYSAIFNED+EDDYDFHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
A0A6J1FMS7 calumenin-like2.7e-1493.18Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYD HDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
A0A6J1JYP4 calumenin-like2.7e-1493.18Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        I QADADKDGRLTL EMIDHPYVFYSAIFNEDDEDDYD HDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27790.1 Calcium-binding EF hand family protein3.5e-0656.1Show/hide
Query:  QADADKDGRLTLAEMIDHPYVFYSAIFNED-DEDDYDFHDE
        +AD DKDG+L+L EM+ H  VFY A+ +ED D++DY  HDE
Subjt:  QADADKDGRLTLAEMIDHPYVFYSAIFNED-DEDDYDFHDE
AT5G08580.1 Calcium-binding EF hand family protein1.6e-1482.22Show/hide
Query:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDD-EDDYDFHDEFR
        I QAD+DKD RLTLAEMI+HPYVFYSAIF+EDD +DDY FHDEFR
Subjt:  ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDD-EDDYDFHDEFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTTGCAGGCGGATGCAGACAAAGATGGACGTCTCACCTTGGCAGAGATGATCGATCATCCATACGTATTTTACAGTGCCATTTTCAATGAAGATGACGAAGACGACTA
TGATTTCCACGATGAGTTTCGT
mRNA sequenceShow/hide mRNA sequence
ATTTTGCAGGCGGATGCAGACAAAGATGGACGTCTCACCTTGGCAGAGATGATCGATCATCCATACGTATTTTACAGTGCCATTTTCAATGAAGATGACGAAGACGACTA
TGATTTCCACGATGAGTTTCGT
Protein sequenceShow/hide protein sequence
ILQADADKDGRLTLAEMIDHPYVFYSAIFNEDDEDDYDFHDEFR