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MS018682 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018682
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhelicase-like transcription factor CHR28
Genome locationscaffold313:1014114..1014218
RNA-Seq ExpressionMS018682
SyntenyMS018682
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659847.1 helicase-like transcription factor CHR28 isoform X1 [Cucumis sativus]4.3e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

XP_031742334.1 helicase-like transcription factor CHR28 isoform X2 [Cucumis sativus]4.3e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

XP_031742335.1 helicase-like transcription factor CHR28 isoform X3 [Cucumis sativus]4.3e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

XP_038875246.1 helicase-like transcription factor CHR28 isoform X1 [Benincasa hispida]4.3e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

XP_038875252.1 helicase-like transcription factor CHR28 isoform X2 [Benincasa hispida]4.3e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

TrEMBL top hitse value%identityAlignment
A0A1S3CPZ0 helicase-like transcription factor CHR282.1e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

A0A6J1CJR9 helicase-like transcription factor CHR282.1e-09100Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

A0A6J1FD31 helicase-like transcription factor CHR284.7e-0997.14Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQ+GGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

A0A6J1JUY9 helicase-like transcription factor CHR284.7e-0997.14Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQ+GGSASRLTVEDLRYLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

A0A6P9EFI7 helicase-like transcription factor CHR28 isoform X11.0e-0894.29Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGEDQSGGSA+RLTVEDL+YLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

SwissProt top hitse value%identityAlignment
Q94BR5 Helicase-like transcription factor CHR283.4e-0982.86Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGED  G SA+RLTV+DL+YLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

Q9LHE4 Helicase-like transcription factor CHR275.0e-0877.14Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKR MVASAFGE+  G SA+RLTV+DL+YLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

Arabidopsis top hitse value%identityAlignment
AT1G11100.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related7.4e-0767.65Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM
        Q++KRKMVASAFGE ++G   S L+VEDL YLFM
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM

AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related2.4e-1082.86Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKRKMVASAFGED  G SA+RLTV+DL+YLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV

AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related3.3e-0770.59Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM
        Q++KR MVASAFGED+ G   S LTVEDL YLFM
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM

AT1G61140.3 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related3.3e-0770.59Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM
        Q++KR MVASAFGED+ G   S LTVEDL YLFM
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFM

AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related3.5e-0977.14Show/hide
Query:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV
        QEEKR MVASAFGE+  G SA+RLTV+DL+YLFMV
Subjt:  QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGAAGAGAAGAGAAAAATGGTTGCATCAGCTTTTGGTGAAGATCAAAGTGGAGGTTCTGCTTCTCGCCTGACAGTAGAAGATCTCAGATATCTCTTTATGGTT
mRNA sequenceShow/hide mRNA sequence
CAGGAAGAGAAGAGAAAAATGGTTGCATCAGCTTTTGGTGAAGATCAAAGTGGAGGTTCTGCTTCTCGCCTGACAGTAGAAGATCTCAGATATCTCTTTATGGTT
Protein sequenceShow/hide protein sequence
QEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV