; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018694 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018694
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA-processing protein UTP23 homolog
Genome locationscaffold313:1121288..1122654
RNA-Seq ExpressionMS018694
SyntenyMS018694
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032659.1 rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.3e-7970.26Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFK+QKRHR+ VRFYT CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG VK+FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ
          CI +VIG+SNAEHFFVATQDTDL+K+LQE IPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  +    ETE+TNED  L D+
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ

Query:  NLETQAM----KKRSTSNELKDKIQFKRKKAK
        N E Q +    KK+   N+LKD+ QFKRKK K
Subjt:  NLETQAM----KKRSTSNELKDKIQFKRKKAK

XP_004143766.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus]1.7e-8273.36Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MR K+QKR RR VRFYT C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  VKLFTTRCVL ELKALGQSYS AF+AAS+L  ARCDHE+RKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN
        EACI DVIGESN EHFFVATQDT+LRK+LQ QIPGVPL++GLRNALFMEQPS +QRQFVKS EE+R+H+SE+ERDLLKK+ KY VE E+TNED  L DQN
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN

Query:  LETQAMKKRSTS--NELKDKIQFKRKKAK
        L+T  +KK+  +  + LKD+ QFKR KAK
Subjt:  LETQAMKKRSTS--NELKDKIQFKRKKAK

XP_008465424.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo]5.9e-8373.68Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MR K+QKR RR VRFYT C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  VKLFTTRCVL ELKALGQSY+ AF+AAS+L  ARCDHE+RKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN
        EACI DVIGESN EHFFVATQDT+LRK+LQ QIPGVPL++GLRN LFMEQPS +QRQFVKS EE+R+HMSE ERDLLKK+ KY VE E+TNED  LGDQN
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN

Query:  LETQAM-KKRSTSNELKDKIQFKRKKAK
        L+ Q + KK++  + LKD+ QFKR KAK
Subjt:  LETQAM-KKRSTSNELKDKIQFKRKKAK

XP_011655276.1 rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]1.7e-8273.36Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MR K+QKR RR VRFYT C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  VKLFTTRCVL ELKALGQSYS AF+AAS+L  ARCDHE+RKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN
        EACI DVIGESN EHFFVATQDT+LRK+LQ QIPGVPL++GLRNALFMEQPS +QRQFVKS EE+R+H+SE+ERDLLKK+ KY VE E+TNED  L DQN
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN

Query:  LETQAMKKRSTS--NELKDKIQFKRKKAK
        L+T  +KK+  +  + LKD+ QFKR KAK
Subjt:  LETQAMKKRSTS--NELKDKIQFKRKKAK

XP_022141733.1 rRNA-processing protein UTP23 homolog [Momordica charantia]1.5e-11598.23Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFKRQKRHRRVVRFY ACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGP+KLFTTRCVLSELKALGQSYSEAFDAAS+LLIARCDHERRKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL
        EACISDVIGESNAEHFFVATQDTDLRKKLQE IPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL

Query:  ETQAMKKRSTSNELKDKIQFKRKKAK
        ETQAMKKRSTSNELKDKIQFKRKKAK
Subjt:  ETQAMKKRSTSNELKDKIQFKRKKAK

TrEMBL top hitse value%identityAlignment
A0A1S3CNY6 rRNA-processing protein UTP23 homolog2.8e-8373.68Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MR K+QKR RR VRFYT C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  VKLFTTRCVL ELKALGQSY+ AF+AAS+L  ARCDHE+RKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN
        EACI DVIGESN EHFFVATQDT+LRK+LQ QIPGVPL++GLRN LFMEQPS +QRQFVKS EE+R+HMSE ERDLLKK+ KY VE E+TNED  LGDQN
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR-KYRVETEETNEDRGLGDQN

Query:  LETQAM-KKRSTSNELKDKIQFKRKKAK
        L+ Q + KK++  + LKD+ QFKR KAK
Subjt:  LETQAM-KKRSTSNELKDKIQFKRKKAK

A0A6J1CLD6 rRNA-processing protein UTP23 homolog7.4e-11698.23Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFKRQKRHRRVVRFY ACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGP+KLFTTRCVLSELKALGQSYSEAFDAAS+LLIARCDHERRKSA
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL
        EACISDVIGESNAEHFFVATQDTDLRKKLQE IPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL

Query:  ETQAMKKRSTSNELKDKIQFKRKKAK
        ETQAMKKRSTSNELKDKIQFKRKKAK
Subjt:  ETQAMKKRSTSNELKDKIQFKRKKAK

A0A6J1E579 rRNA-processing protein UTP23 homolog isoform X11.2e-7870.26Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFK+QKRHR+ VRFYT CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG VK+FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ
          CI +VIG+SNAEHFFVATQDTDL+K+LQE IPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  +    ETE TNED  L  +
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ

Query:  NLETQAM----KKRSTSNELKDKIQFKRKKAK
        N E Q +    KKR   N+LKD+ QFKRKK K
Subjt:  NLETQAM----KKRSTSNELKDKIQFKRKKAK

A0A6J1JRB3 rRNA-processing protein UTP23 homolog isoform X21.2e-7870.26Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFK+QKRHR+ VRFYT CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG VK+FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ
          CI +VIG+SNAEHFFVATQDTDL+K+LQE IPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  +    ETE TNED  L  +
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ

Query:  NLETQAM----KKRSTSNELKDKIQFKRKKAK
        N E Q +    KKR   N+LKD+ QFKRKK K
Subjt:  NLETQAM----KKRSTSNELKDKIQFKRKKAK

A0A6J1JT87 rRNA-processing protein UTP23 homolog isoform X11.2e-7870.26Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MRFK+QKRHR+ VRFYT CFGFR+PFKVLCDGTFVHHLLSN+I+PAD ALAK +GG VK+FTTRCVL ELKALG SYS+AF+AAS L  ARCDHE RK A
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ
          CI +VIG+SNAEHFFVATQDTDL+K+LQE IPGVPL++GLRNALFMEQP+ L+RQFVKSSEE+R H+SE+E +LL+K  +    ETE TNED  L  +
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKK--RKYRVETEETNEDRGLGDQ

Query:  NLETQAM----KKRSTSNELKDKIQFKRKKAK
        N E Q +    KKR   N+LKD+ QFKRKK K
Subjt:  NLETQAM----KKRSTSNELKDKIQFKRKKAK

SwissProt top hitse value%identityAlignment
O74862 rRNA-processing protein utp231.5e-1732.72Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS
        MR KR K +R+++  Y   FGFR+P++VL D  F+   LS + +    ALA+T+ G +K   T+C + +L +      +    A      RC H +   S
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS

Query:  AEACISDV--IGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLL--KKR---KYRVETEETNED
           CI  V  I   N   + VATQD +LR+ L+  +PGVPL+Y  R+ + +E  S        + E  ++ MS+ E+ LL  KKR   +  ++ ++T E 
Subjt:  AEACISDV--IGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLL--KKR---KYRVETEETNED

Query:  RGL-GDQNLETQAMKKR
          L G ++   +A KKR
Subjt:  RGL-GDQNLETQAMKKR

Q08DU1 rRNA-processing protein UTP23 homolog6.2e-1928.34Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS
        M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   +  L + +    +L TTRCVL EL+ LG+    A   A K  +  C H +   S
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS

Query:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQP-----------------SVLQRQFVKSSEEERLHMSELERDLLKKR--
           C+  ++ + N  H+F+ATQD +L  K++++ PG+PL++ ++N + +++P                 SV ++Q ++  +EE+  + + E+   KKR  
Subjt:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQP-----------------SVLQRQFVKSSEEERLHMSELERDLLKKR--

Query:  ----------KYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDK
                  K + +T++TN      ++  + + ++ RSTS  L +K
Subjt:  ----------KYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDK

Q12339 rRNA-processing protein UTP232.7e-1430.8Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSE-AFDAASKLLIARCDHERR--
        MR KR K +R+ +  Y+  F FR+P++VL D   V    +N      + L +T+   VK+  T+C    ++AL ++ ++ A + A +    RC+H  +  
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSE-AFDAASKLLIARCDHERR--

Query:  KSAEACISDVIGES--NAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLH--MSELERDLLKKRKYRVETEETNEDR
        KS   CI  V+  S  N   + VA+QD DLR+KL+  +PGVPL++  R+ + ME  S    +  K +EE++L+  +++   + L++       E   + R
Subjt:  KSAEACISDVIGES--NAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLH--MSELERDLLKKRKYRVETEETNEDR

Query:  GLGDQNLETQAMKKR----STSNELKDKIQFKRKKAK
         LG +     ++KK+    S S+E+KDK    ++K K
Subjt:  GLGDQNLETQAMKKR----STSNELKDKIQFKRKKAK

Q9BRU9 rRNA-processing protein UTP23 homolog1.1e-2032.74Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS
        M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   +  L + + G  +L TTRCVL EL+ LG+    A   A K  +  C H +   S
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDH-ERRKS

Query:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQN
           C+  ++ E N  H+FVATQD +L  K++++ PGVPL++ ++N + +++PS     FVK+ E  +L +S  E++ +K  K         E++GL    
Subjt:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQN

Query:  LETQAMKKRSTSNELKDKIQFKRKKA
         +++  K++  S         K+KKA
Subjt:  LETQAMKKRSTSNELKDKIQFKRKKA

Q9CX11 rRNA-processing protein UTP23 homolog7.4e-2032.89Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRK-S
        M+  RQK  ++ + F+   FG R+P+++L DGTF    L  RI   D  L + + G  +L TTRCVL EL+ LG+    A   A K  +  C H +   S
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRK-S

Query:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGL-GDQ
           C+  ++ E N  H+FVATQD +L  K+ ++ PG+PL++ ++N + +++PS     FVK+ E  +L +S  E+  +K+ K         E++GL  + 
Subjt:  AEACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGL-GDQ

Query:  NLETQAMKKRSTSNELKDKIQFKRKKAK
        +L  +  KK+            K+KKA+
Subjt:  NLETQAMKKRSTSNELKDKIQFKRKKAK

Arabidopsis top hitse value%identityAlignment
AT2G34570.1 PIN domain-like family protein3.1e-5852.63Show/hide
Query:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA
        MR KRQK++RR VRF+T C+GFRQP+KVLCDGTFVHHL++N I PAD A+++ +GGPVKLFTTRCV++EL+ LG+ ++E+ +AA  L  A C+HE  K+A
Subjt:  MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSA

Query:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL
        + C+S+VIG  N EHFF+ TQD + R+KLQ++   VPLV+GLRN L ++QPS  QRQ  K SE +RL M++ E+ LL KR  ++      E       N 
Subjt:  EACISDVIGESNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNL

Query:  ETQAMKKRSTSNEL--KDKIQFKRKKAK
        E    +  ST N L  KD+ QFKR +AK
Subjt:  ETQAMKKRSTSNEL--KDKIQFKRKKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCAAAAGGCAAAAGCGTCACCGGAGAGTTGTGAGATTTTACACTGCATGTTTTGGATTCAGGCAGCCATTTAAAGTCCTATGTGATGGAACTTTTGTGCATCA
CCTTCTCTCCAATCGTATAGTGCCTGCTGATAATGCCCTTGCCAAAACAATTGGTGGCCCAGTCAAGCTTTTCACTACCAGATGTGTACTCTCAGAGTTGAAGGCTCTTG
GCCAATCCTATTCAGAAGCTTTTGATGCGGCTAGTAAGCTGCTTATTGCTAGATGTGACCATGAGAGAAGAAAGAGTGCTGAGGCATGCATCAGTGACGTGATTGGCGAG
TCAAATGCTGAGCATTTTTTTGTTGCCACTCAGGATACTGATCTCAGGAAGAAGCTGCAAGAGCAGATACCTGGGGTTCCACTCGTATATGGTCTGAGAAATGCACTTTT
CATGGAGCAACCATCTGTCTTGCAACGTCAGTTTGTCAAATCTTCAGAAGAAGAAAGACTGCACATGTCTGAGCTGGAACGTGATCTATTAAAGAAAAGGAAGTACAGAG
TGGAAACTGAGGAAACTAATGAAGATAGGGGTTTGGGAGATCAAAATTTAGAGACACAAGCTATGAAAAAGAGAAGCACTTCAAATGAACTGAAGGATAAAATTCAATTT
AAGAGAAAGAAAGCAAAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCAAAAGGCAAAAGCGTCACCGGAGAGTTGTGAGATTTTACACTGCATGTTTTGGATTCAGGCAGCCATTTAAAGTCCTATGTGATGGAACTTTTGTGCATCA
CCTTCTCTCCAATCGTATAGTGCCTGCTGATAATGCCCTTGCCAAAACAATTGGTGGCCCAGTCAAGCTTTTCACTACCAGATGTGTACTCTCAGAGTTGAAGGCTCTTG
GCCAATCCTATTCAGAAGCTTTTGATGCGGCTAGTAAGCTGCTTATTGCTAGATGTGACCATGAGAGAAGAAAGAGTGCTGAGGCATGCATCAGTGACGTGATTGGCGAG
TCAAATGCTGAGCATTTTTTTGTTGCCACTCAGGATACTGATCTCAGGAAGAAGCTGCAAGAGCAGATACCTGGGGTTCCACTCGTATATGGTCTGAGAAATGCACTTTT
CATGGAGCAACCATCTGTCTTGCAACGTCAGTTTGTCAAATCTTCAGAAGAAGAAAGACTGCACATGTCTGAGCTGGAACGTGATCTATTAAAGAAAAGGAAGTACAGAG
TGGAAACTGAGGAAACTAATGAAGATAGGGGTTTGGGAGATCAAAATTTAGAGACACAAGCTATGAAAAAGAGAAGCACTTCAAATGAACTGAAGGATAAAATTCAATTT
AAGAGAAAGAAAGCAAAG
Protein sequenceShow/hide protein sequence
MRFKRQKRHRRVVRFYTACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPVKLFTTRCVLSELKALGQSYSEAFDAASKLLIARCDHERRKSAEACISDVIGE
SNAEHFFVATQDTDLRKKLQEQIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKRKYRVETEETNEDRGLGDQNLETQAMKKRSTSNELKDKIQF
KRKKAK