; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018701 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018701
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCoiled-coil domain-containing protein 86
Genome locationscaffold313:1199358..1199933
RNA-Seq ExpressionMS018701
SyntenyMS018701
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR005579 - Cgr1-like
IPR026570 - Coiled-coil domain-containing protein 86


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143761.1 protein PXR1 [Cucumis sativus]1.2e-7989.64Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRK  REEA+ SL I +SENAD  MEIDDS  PPPAKRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]3.6e-8190.67Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRK  REEA+ SL I +SENAD +MEIDDS  PPPAKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_022141739.1 protein PXR1 [Momordica charantia]4.1e-9399.48Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEID+SFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_022939634.1 protein PXR1 [Cucurbita moschata]7.5e-7989.06Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEA++SLNI  SENADASM++D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM 
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
XP_038874831.1 protein PXR1 [Benincasa hispida]1.1e-8291.67Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEA+ SLNI +SENAD SMEIDDS PPP+KRSAIPSSENPDKPTF NPTYDGVIAGKVSGRKWKQPRKHR SAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QK IKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
TrEMBL top hitse value%identityAlignment
A0A0A0KNG5 Coiled-coil domain-containing protein 865.6e-8089.64Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRK  REEA+ SL I +SENAD  MEIDDS  PPPAKRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A1S3CP36 Coiled-coil domain-containing protein 861.7e-8190.67Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRK  REEA+ SL I +SENAD +MEIDDS  PPPAKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A5D3BKZ5 Coiled-coil domain-containing protein 861.7e-8190.67Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACTIDFR LDEGFGGKTYKRK  REEA+ SL I +SENAD +MEIDDS  PPPAKRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAM
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSF-PPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        QVSRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A6J1CIY7 Coiled-coil domain-containing protein 862.0e-9399.48Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEID+SFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
A0A6J1FHS9 Coiled-coil domain-containing protein 863.6e-7989.06Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEA++SLNI  SENADASM++D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM 
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
        VSRKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31410.1 unknown protein1.4e-5464.95Show/hide
Query:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRAS
        MACT+DFRCLDEGFGGKTYKRKRE +E   +  I D    +ASM+ID + PP AKRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S
Subjt:  MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRAS

Query:  AMQVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDFI
           V  +    EE ++Q+ IK A++ER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +PD+ +
Subjt:  AMQVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDFI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCACCATCGACTTCCGGTGCCTGGACGAGGGATTCGGGGGAAAAACCTACAAGCGAAAACGGGAACGGGAAGAAGCTCAGAACAGCCTCAACATCAACGACTC
TGAAAATGCCGACGCCTCCATGGAGATCGACGACTCCTTTCCGCCGCCGGCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCCGACAAACCGACATTCGGAAACCCTA
CCTACGACGGCGTTATCGCCGGAAAGGTCTCGGGACGGAAGTGGAAGCAGCCGAGGAAGCACAGGGCGTCTGCCATGCAGGTGAGCCGGAAAGGCACTACGTTCGAGGAG
AGGGAGAAGCAGAAGATGATTAAGGCGGCGTTTAGGGAGCGCAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAAGAGAAAGAAGAGAGAGGAGAGGGA
GAAGAAGAAGAAGGAGAACATCTTGAGATCTGGAACTAAGCTACAGAAGATAACTAATCCCAAGACACTCAAGAAGATTGCCAAGTCTAAGCAGAAGAAACTCCTTAAGG
TTGTTCCTGACGATTTCATCAAGAAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCACCATCGACTTCCGGTGCCTGGACGAGGGATTCGGGGGAAAAACCTACAAGCGAAAACGGGAACGGGAAGAAGCTCAGAACAGCCTCAACATCAACGACTC
TGAAAATGCCGACGCCTCCATGGAGATCGACGACTCCTTTCCGCCGCCGGCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCCGACAAACCGACATTCGGAAACCCTA
CCTACGACGGCGTTATCGCCGGAAAGGTCTCGGGACGGAAGTGGAAGCAGCCGAGGAAGCACAGGGCGTCTGCCATGCAGGTGAGCCGGAAAGGCACTACGTTCGAGGAG
AGGGAGAAGCAGAAGATGATTAAGGCGGCGTTTAGGGAGCGCAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAAGAGAAAGAAGAGAGAGGAGAGGGA
GAAGAAGAAGAAGGAGAACATCTTGAGATCTGGAACTAAGCTACAGAAGATAACTAATCCCAAGACACTCAAGAAGATTGCCAAGTCTAAGCAGAAGAAACTCCTTAAGG
TTGTTCCTGACGATTTCATCAAGAAA
Protein sequenceShow/hide protein sequence
MACTIDFRCLDEGFGGKTYKRKREREEAQNSLNINDSENADASMEIDDSFPPPAKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVSRKGTTFEE
REKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDFIKK