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MS018704 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018704
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWW domain-containing adapter protein with coiled-coil
Genome locationscaffold313:1228662..1229480
RNA-Seq ExpressionMS018704
SyntenyMS018704
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601958.1 hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4179.67Show/hide
Query:  EEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRSTLPHS
        EEPQFP  EP+ Q  P+NQPIL P QP ETN DSSV SVELPDASLLLNSPTSSSL  GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS LPHS
Subjt:  EEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRSTLPHS

Query:  KNVPDTLGRSLVPPQLTGRSVLI
        KNVP+T+GR LVPPQLTGRS ++
Subjt:  KNVPDTLGRSLVPPQLTGRSVLI

XP_022141364.1 WW domain-containing adapter protein with coiled-coil [Momordica charantia]3.1e-5796.06Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        NHRVEEPQFPKHEPQPQPPPLNQPIL PNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRV AAMAANASRKRETNVSASALPRSKVPRST
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVPDTLGRSLVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

XP_022990875.1 uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima]2.4e-4177.17Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        +H  +EPQFP  EP+ Q  P+NQPIL P QP ETN DSSV SVELPDASLLLNSPTSSSL  GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS 
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVP+T+GR LVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

XP_023517928.1 uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo]7.0e-4179.67Show/hide
Query:  EEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRSTLPHS
        EEPQFP  EP+ Q  P+NQPIL P QP ETN DSSV SVELPDASLLLNSPTSSSL  GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS LPHS
Subjt:  EEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRSTLPHS

Query:  KNVPDTLGRSLVPPQLTGRSVLI
        KNVP+T+GR LVPPQLTGRS ++
Subjt:  KNVPDTLGRSLVPPQLTGRSVLI

XP_038874519.1 uncharacterized protein LOC120067146 [Benincasa hispida]2.8e-4277.95Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        N  V EPQFPKHEP+P+ PP+NQPIL PNQ  ET  + SV SVELPDASLLLNSP+SSSLF GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS+
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVPDT G  LVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

TrEMBL top hitse value%identityAlignment
A0A0A0KQH2 Uncharacterized protein1.7e-4076.56Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGD-SSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRS
        NH + EP  PKHEP+PQ PPLNQPI+ PNQ  ETN + SSV  V LPDASLLLNSPTSSSLF GSDHSSRV AAMAANASRKRETNV  S+LPRSK PRS
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGD-SSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRS

Query:  TLPHSKNVPDTLGRSLVPPQLTGRSVLI
        +LPHSKNVPDT G  LVPPQLTGRS ++
Subjt:  TLPHSKNVPDTLGRSLVPPQLTGRSVLI

A0A1S3CP27 uncharacterized protein LOC1035031867.5e-4177.34Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGD-SSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRS
        NH V EPQ PK+EP+PQ PP+NQPI+ PNQ  ETN + SSV  VELPDASLLLNS TSSSLF GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGD-SSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRS

Query:  TLPHSKNVPDTLGRSLVPPQLTGRSVLI
        +LPHSKNVPDT G  LVPPQLTGRS ++
Subjt:  TLPHSKNVPDTLGRSLVPPQLTGRSVLI

A0A6J1CIF3 WW domain-containing adapter protein with coiled-coil1.5e-5796.06Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        NHRVEEPQFPKHEPQPQPPPLNQPIL PNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRV AAMAANASRKRETNVSASALPRSKVPRST
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVPDTLGRSLVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

A0A6J1HMD3 uncharacterized protein LOC111464275 isoform X19.8e-4176.38Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        +H  +EPQFP  EP+ Q  P+NQ IL P QP ETN DSSV SVELPDASLLLNSPTSSSL  GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS 
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVP+T+GR LVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

A0A6J1JRA7 uncharacterized protein LOC111487632 isoform X11.2e-4177.17Show/hide
Query:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST
        +H  +EPQFP  EP+ Q  P+NQPIL P QP ETN DSSV SVELPDASLLLNSPTSSSL  GSDHSSRV AAMAANASRKRETNV  S+LPRSKVPRS 
Subjt:  NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRST

Query:  LPHSKNVPDTLGRSLVPPQLTGRSVLI
        LPHSKNVP+T+GR LVPPQLTGRS ++
Subjt:  LPHSKNVPDTLGRSLVPPQLTGRSVLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G13470.1 unknown protein2.6e-1762.2Show/hide
Query:  ELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALP-RSKVPRSTLPHSKNVPDTLGRSLVPPQLTGRS
        +LPDA LLL SPT + + GG DH+S V AAMA +A RKR+ + +AS+LP R K+PR  LPHSKN P+TLG  LVPPQL GRS
Subjt:  ELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALP-RSKVPRSTLPHSKNVPDTLGRSLVPPQLTGRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCACCGCGTGGAGGAGCCTCAGTTCCCGAAGCACGAACCTCAGCCTCAACCTCCTCCTCTCAACCAGCCCATTCTTACACCGAATCAGCCATTGGAAACTAATGGGGA
CTCTTCTGTGTTTTCGGTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTGGTGGTAGCGATCACTCTTCACGAGTGACTGCAGCTA
TGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTCAGCATCTGCTCTTCCCCGGAGTAAAGTTCCAAGATCGACTTTGCCTCACTCAAAGAATGTTCCAGATACT
TTAGGTCGATCGTTGGTTCCACCTCAGCTTACCGGAAGGTCTGTTCTTATT
mRNA sequenceShow/hide mRNA sequence
AACCACCGCGTGGAGGAGCCTCAGTTCCCGAAGCACGAACCTCAGCCTCAACCTCCTCCTCTCAACCAGCCCATTCTTACACCGAATCAGCCATTGGAAACTAATGGGGA
CTCTTCTGTGTTTTCGGTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTGGTGGTAGCGATCACTCTTCACGAGTGACTGCAGCTA
TGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTCAGCATCTGCTCTTCCCCGGAGTAAAGTTCCAAGATCGACTTTGCCTCACTCAAAGAATGTTCCAGATACT
TTAGGTCGATCGTTGGTTCCACCTCAGCTTACCGGAAGGTCTGTTCTTATT
Protein sequenceShow/hide protein sequence
NHRVEEPQFPKHEPQPQPPPLNQPILTPNQPLETNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVTAAMAANASRKRETNVSASALPRSKVPRSTLPHSKNVPDT
LGRSLVPPQLTGRSVLI