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MS018745 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018745
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationscaffold313:1662676..1663164
RNA-Seq ExpressionMS018745
SyntenyMS018745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.9e-2347.8Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP---------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVS
        +N L S I AIN  N  I S               LPIC ++QRP          ++GK  LGLTF+A++ +  TS P+SSPPL T LF AA L+SF VS
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP---------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVS

Query:  LAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS
         AG  LQN  PRIA L EKIGAL+ A+GVC++ SLL+ QN  WI WLA    ++AF++S
Subjt:  LAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]2.3e-2043.53Show/hide
Query:  LSSFINALSSLINALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPIC---------NSVQRPQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLF
        + S    +S  +N L SLI +IN  N  I               + LPIC         NS +   ++G   LGLTF+A++ +  TS  +SSPPL T LF
Subjt:  LSSFINALSSLINALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPIC---------NSVQRPQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLF

Query:  GAAKLVSFVVSLAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS
        GAA L+SF VS  G  LQ+  PRIA L EKIGAL+ A+GVC++ SLL+ QN  WI WLAC   ++AF++S
Subjt:  GAAKLVSFVVSLAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS

KGN49806.1 hypothetical protein Csa_004683 [Cucumis sativus]5.8e-2449.04Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRPQ-----SLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAGN
        +N L+SLI A+   N GI S TW   GG   +SDCLPI   +QRP        G  FL LTF+AIV +  +  PSSS PLP+ LF A  L SF+ S  G 
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRPQ-----SLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAGN

Query:  CLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIISSK
         LQ   P+ A LL+  GAL  A+G C+I SLL+  N  WICWLA   I+ AFIIS K
Subjt:  CLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIISSK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]8.7e-2042.24Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQR--------PQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSL
        ++A SS I  I+  N G+        G   T S+CLP+   +Q+         Q LGKI L L+F+A++ +  +S P+S PPL    F AA  +SF VS 
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQR--------PQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSL

Query:  AGNCLQNEHPRIANLLEKIGALLVAVGVCVITS-LLVPQNLGWICWLACVSIVLAFIISSK
        A   L N  PR A+L EK+GAL  A GVC I S LLV QN  WICW+AC   ++ F +S K
Subjt:  AGNCLQNEHPRIANLLEKIGALLVAVGVCVITS-LLVPQNLGWICWLACVSIVLAFIISSK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]1.2e-2463.79Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAG
        +NALSS I AIN  N GI SFT  WGGGTST SDCLPIC  +QRP      QSLGK  LGLTF+A V+ L  SLPSS P LPT+LFGAA L+SF VS AG
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAG

Query:  NCLQNEHPRIANLLEK
          LQ  +PR+A L EK
Subjt:  NCLQNEHPRIANLLEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.1e-2043.53Show/hide
Query:  LSSFINALSSLINALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPIC---------NSVQRPQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLF
        + S    +S  +N L SLI +IN  N  I               + LPIC         NS +   ++G   LGLTF+A++ +  TS  +SSPPL T LF
Subjt:  LSSFINALSSLINALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPIC---------NSVQRPQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLF

Query:  GAAKLVSFVVSLAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS
        GAA L+SF VS  G  LQ+  PRIA L EKIGAL+ A+GVC++ SLL+ QN  WI WLAC   ++AF++S
Subjt:  GAAKLVSFVVSLAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS

A0A0A0KJP2 Uncharacterized protein4.2e-2042.24Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQR--------PQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSL
        ++A SS I  I+  N G+        G   T S+CLP+   +Q+         Q LGKI L L+F+A++ +  +S P+S PPL    F AA  +SF VS 
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQR--------PQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSL

Query:  AGNCLQNEHPRIANLLEKIGALLVAVGVCVITS-LLVPQNLGWICWLACVSIVLAFIISSK
        A   L N  PR A+L EK+GAL  A GVC I S LLV QN  WICW+AC   ++ F +S K
Subjt:  AGNCLQNEHPRIANLLEKIGALLVAVGVCVITS-LLVPQNLGWICWLACVSIVLAFIISSK

A0A0A0KQ03 Uncharacterized protein2.8e-2449.04Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRPQ-----SLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAGN
        +N L+SLI A+   N GI S TW   GG   +SDCLPI   +QRP        G  FL LTF+AIV +  +  PSSS PLP+ LF A  L SF+ S  G 
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRPQ-----SLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAGN

Query:  CLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIISSK
         LQ   P+ A LL+  GAL  A+G C+I SLL+  N  WICWLA   I+ AFIIS K
Subjt:  CLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIISSK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.4e-2347.8Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP---------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVS
        +N L S I AIN  N  I S               LPIC ++QRP          ++GK  LGLTF+A++ +  TS P+SSPPL T LF AA L+SF VS
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP---------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVS

Query:  LAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS
         AG  LQN  PRIA L EKIGAL+ A+GVC++ SLL+ QN  WI WLA    ++AF++S
Subjt:  LAGNCLQNEHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIIS

A0A6J1CY58 uncharacterized protein LOC1110156585.7e-2563.79Show/hide
Query:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAG
        +NALSS I AIN  N GI SFT  WGGGTST SDCLPIC  +QRP      QSLGK  LGLTF+A V+ L  SLPSS P LPT+LFGAA L+SF VS AG
Subjt:  INALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRP------QSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAG

Query:  NCLQNEHPRIANLLEK
          LQ  +PR+A L EK
Subjt:  NCLQNEHPRIANLLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCATCCTTCATCAATGCACTCTCATCCCTCATCAATGCACTCTCATCCCTCATCAATGCAATCAATGGGGAAAATTCTGGAATCTGTAGTTTTACCTGGAGTTGGGG
AGGGGGAACATCCACATCATCAGATTGCCTACCCATTTGCAACAGTGTGCAGAGGCCTCAGAGCCTTGGGAAGATATTTCTTGGTCTGACTTTTCGGGCAATTGTAGTAG
TGTTGTCCACCAGCTTACCCAGTTCATCCCCTCCACTTCCTACAGTTCTTTTTGGAGCTGCTAAGTTGGTTAGCTTTGTAGTTTCCCTTGCTGGAAATTGCCTTCAAAAT
GAACACCCGAGAATTGCAAATTTGTTAGAAAAGATCGGTGCTCTTCTTGTTGCTGTTGGTGTCTGCGTCATAACAAGTCTTCTTGTTCCTCAGAACTTGGGTTGGATCTG
TTGGCTGGCATGTGTCTCCATCGTGCTAGCCTTTATTATATCATCCAAG
mRNA sequenceShow/hide mRNA sequence
CTCTCATCCTTCATCAATGCACTCTCATCCCTCATCAATGCACTCTCATCCCTCATCAATGCAATCAATGGGGAAAATTCTGGAATCTGTAGTTTTACCTGGAGTTGGGG
AGGGGGAACATCCACATCATCAGATTGCCTACCCATTTGCAACAGTGTGCAGAGGCCTCAGAGCCTTGGGAAGATATTTCTTGGTCTGACTTTTCGGGCAATTGTAGTAG
TGTTGTCCACCAGCTTACCCAGTTCATCCCCTCCACTTCCTACAGTTCTTTTTGGAGCTGCTAAGTTGGTTAGCTTTGTAGTTTCCCTTGCTGGAAATTGCCTTCAAAAT
GAACACCCGAGAATTGCAAATTTGTTAGAAAAGATCGGTGCTCTTCTTGTTGCTGTTGGTGTCTGCGTCATAACAAGTCTTCTTGTTCCTCAGAACTTGGGTTGGATCTG
TTGGCTGGCATGTGTCTCCATCGTGCTAGCCTTTATTATATCATCCAAG
Protein sequenceShow/hide protein sequence
LSSFINALSSLINALSSLINAINGENSGICSFTWSWGGGTSTSSDCLPICNSVQRPQSLGKIFLGLTFRAIVVVLSTSLPSSSPPLPTVLFGAAKLVSFVVSLAGNCLQN
EHPRIANLLEKIGALLVAVGVCVITSLLVPQNLGWICWLACVSIVLAFIISSK