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MS018749 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018749
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationscaffold313:1685766..1686209
RNA-Seq ExpressionMS018749
SyntenyMS018749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.9e-3063.7Show/hide
Query:  MNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-FFEMHFPRTAL
        MN    FIT INERNP INS LPICI M +P+P    K+  N GK IL LTFQA       + +SSPPLLT LF AA+LISFAVSFAG F +  FPR AL
Subjt:  MNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-FFEMHFPRTAL

Query:  LFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        LFEKI  L AAIGV IVASLL+ HQNFAWI WL   FSL+AF++SF
Subjt:  LFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1845.86Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPVKSPQ---NPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-
        M STP+  ++DMN  S                    I+       + PQ   N GKI+  LTFQA       T +S PPLL +LF AAMLIS A+S A  
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPVKSPQ---NPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-

Query:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        F +  FPR AL F KI  + AA+G  I+ASLLL HQNF+WIPWL C F+L+AFI+SF
Subjt:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]2.9e-3059.24Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-
        M S+ +Q ++DMN     IT+INERNP IN  LPICI M   +P    K+  N G  IL LTFQA       +++SSPPLLT LFGAA+LISFAVSF G 
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-

Query:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        F +  FPR ALLFEKI  L AAIGV I+ASLL+ HQNFAWI WL C FSL+AF++SF
Subjt:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]2.1e-2550.92Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRI------NSFLPICIKMLK--PAPVKSPQNPGKIILSLTFQAT--------TSSSPPLLTDLFGAAMLISFA
        MAST  QT++DM+A S FI TI++RN  +      ++ LP+ I+M +   A   S Q  GKIILSL+FQA          +S PPLL   F AA+ ISFA
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRI------NSFLPICIKMLK--PAPVKSPQNPGKIILSLTFQAT--------TSSSPPLLTDLFGAAMLISFA

Query:  VSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        VSFA  F    FPRTA LFEK+  LF+A GV  +AS LL HQNFAWI W+ CTFS++ F +SF
Subjt:  VSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]3.2e-2158.73Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRINSF------------LPICIKMLKPAPVKSPQNPGKIILSLTFQAT-------TSSSPPLLTDLFGAAMLI
        MASTP+QT+VDMNA S FIT INERN  I+SF            LPICI+M +P P KS Q+ GK IL LTFQA         SS P L T LFGAA+LI
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRINSF------------LPICIKMLKPAPVKSPQNPGKIILSLTFQAT-------TSSSPPLLTDLFGAAMLI

Query:  SFAVSFAG-FFEMHFPRTALLFEKIV
        SFAVSFAG F +  +PR ALLFEK V
Subjt:  SFAVSFAG-FFEMHFPRTALLFEKIV

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.4e-3059.24Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-
        M S+ +Q ++DMN     IT+INERNP IN  LPICI M   +P    K+  N G  IL LTFQA       +++SSPPLLT LFGAA+LISFAVSF G 
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-

Query:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        F +  FPR ALLFEKI  L AAIGV I+ASLL+ HQNFAWI WL C FSL+AF++SF
Subjt:  FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

A0A0A0KJP2 Uncharacterized protein1.0e-2550.92Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRI------NSFLPICIKMLK--PAPVKSPQNPGKIILSLTFQAT--------TSSSPPLLTDLFGAAMLISFA
        MAST  QT++DM+A S FI TI++RN  +      ++ LP+ I+M +   A   S Q  GKIILSL+FQA          +S PPLL   F AA+ ISFA
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRI------NSFLPICIKMLK--PAPVKSPQNPGKIILSLTFQAT--------TSSSPPLLTDLFGAAMLISFA

Query:  VSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        VSFA  F    FPRTA LFEK+  LF+A GV  +AS LL HQNFAWI W+ CTFS++ F +SF
Subjt:  VSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

A0A0A0KQ03 Uncharacterized protein2.5e-1646.06Show/hide
Query:  MAST-PRQTTVDMNAHSYFITTINERNPRINS---------FLPICIKMLKPAPVKSPQNPGKIILSLTFQA--------TTSSSPPLLTDLFGAAMLIS
        MA T P + ++DMN  +  I  +  RNP I+S          LPI IKM +P+PV SPQ  G   LSLTFQA          SSS PL + LF A ML S
Subjt:  MAST-PRQTTVDMNAHSYFITTINERNPRINS---------FLPICIKMLKPAPVKSPQNPGKIILSLTFQA--------TTSSSPPLLTDLFGAAMLIS

Query:  FAVSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        F  S+ G   +  FP+TA L +    LFAAIG  I+ SLLL + NF WI WL     L AFIISF
Subjt:  FAVSFAG-FFEMHFPRTALLFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.4e-3063.7Show/hide
Query:  MNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-FFEMHFPRTAL
        MN    FIT INERNP INS LPICI M +P+P    K+  N GK IL LTFQA       + +SSPPLLT LF AA+LISFAVSFAG F +  FPR AL
Subjt:  MNAHSYFITTINERNPRINSFLPICIKMLKPAPV---KSPQNPGKIILSLTFQA-------TTSSSPPLLTDLFGAAMLISFAVSFAG-FFEMHFPRTAL

Query:  LFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF
        LFEKI  L AAIGV IVASLL+ HQNFAWI WL   FSL+AF++SF
Subjt:  LFEKI-VLFAAIGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISF

A0A6J1CY58 uncharacterized protein LOC1110156581.5e-2158.73Show/hide
Query:  MASTPRQTTVDMNAHSYFITTINERNPRINSF------------LPICIKMLKPAPVKSPQNPGKIILSLTFQAT-------TSSSPPLLTDLFGAAMLI
        MASTP+QT+VDMNA S FIT INERN  I+SF            LPICI+M +P P KS Q+ GK IL LTFQA         SS P L T LFGAA+LI
Subjt:  MASTPRQTTVDMNAHSYFITTINERNPRINSF------------LPICIKMLKPAPVKSPQNPGKIILSLTFQAT-------TSSSPPLLTDLFGAAMLI

Query:  SFAVSFAG-FFEMHFPRTALLFEKIV
        SFAVSFAG F +  +PR ALLFEK V
Subjt:  SFAVSFAG-FFEMHFPRTALLFEKIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAACTCCACGCCAGACCACTGTGGATATGAATGCACACTCTTACTTTATCACTACAATCAATGAAAGAAATCCTAGAATCAACAGTTTTCTGCCCATTTGCAT
CAAAATGCTGAAGCCTGCACCAGTCAAGAGTCCCCAGAATCCTGGGAAGATAATTCTGAGTCTTACTTTTCAGGCTACCACGTCATCATCTCCTCCGCTTTTGACAGATC
TTTTTGGGGCTGCTATGTTGATCAGCTTCGCAGTCTCGTTTGCTGGATTTTTCGAAATGCATTTCCCACGAACCGCACTTTTGTTTGAAAAGATTGTTCTTTTTGCTGCA
ATTGGCGTCTGGATCGTAGCAAGCCTTCTCCTAACCCATCAGAACTTCGCTTGGATCCCTTGGCTGGAATGTACCTTCTCCTTGCTAGCCTTTATTATATCGTTCATC
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAACTCCACGCCAGACCACTGTGGATATGAATGCACACTCTTACTTTATCACTACAATCAATGAAAGAAATCCTAGAATCAACAGTTTTCTGCCCATTTGCAT
CAAAATGCTGAAGCCTGCACCAGTCAAGAGTCCCCAGAATCCTGGGAAGATAATTCTGAGTCTTACTTTTCAGGCTACCACGTCATCATCTCCTCCGCTTTTGACAGATC
TTTTTGGGGCTGCTATGTTGATCAGCTTCGCAGTCTCGTTTGCTGGATTTTTCGAAATGCATTTCCCACGAACCGCACTTTTGTTTGAAAAGATTGTTCTTTTTGCTGCA
ATTGGCGTCTGGATCGTAGCAAGCCTTCTCCTAACCCATCAGAACTTCGCTTGGATCCCTTGGCTGGAATGTACCTTCTCCTTGCTAGCCTTTATTATATCGTTCATC
Protein sequenceShow/hide protein sequence
MASTPRQTTVDMNAHSYFITTINERNPRINSFLPICIKMLKPAPVKSPQNPGKIILSLTFQATTSSSPPLLTDLFGAAMLISFAVSFAGFFEMHFPRTALLFEKIVLFAA
IGVWIVASLLLTHQNFAWIPWLECTFSLLAFIISFI