CuGenDBv2

Gene ID	MS018763
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FAM192A_Fyv6_N domain-containing protein
Genome location	scaffold313:1765648..1769744
RNA-Seq Expression	MS018763
Synteny	MS018763
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR019331 - FAM192A/Fyv6, N-terminal IPR039845 - PSME3-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ98134.1 protein FAM192A [Cucumis melo var. makuwa]

6.0e-79

81.69

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-
        SFQAAVAAQS +L+E++E+TPPAP AQEKASVRRETP +R PSMII+VKPQAKKARIEPRSP+ A          + EPS+S +T ++  DRP EAA I 
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_008466362.1 PREDICTED: protein FAM192A [Cucumis melo]

6.0e-79

81.69

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-
        SFQAAVAAQS +L+E++E+TPPAP AQEKASVRRETP +R PSMII+VKPQAKKARIEPRSP+ A          + EPS+S +T ++  DRP EAA I 
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_022146349.1 protein FAM192A [Momordica charantia]

5.4e-96

98.02

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEETRNSIGDRPHEAATIGLVSYSDESED
        SFQAAVAAQSTMLHELKEVTPPAPTAQEK SVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESE+T NSIGDRPHEAATIGLVSYS ESED
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEETRNSIGDRPHEAATIGLVSYSDESED

Query:  ED
        ED
Subjt:  ED

XP_022993730.1 protein FAM192A [Cucurbita maxima]

1.0e-78

81.22

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+E+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI
        SFQAAVAAQS +L+E++E+TPPAP AQEKA VR+ETP TR PSMII+VKPQAKKARIEPRSPEKA          + E SES  T ++  DRP EAA TI
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_023549588.1 protein FAM192A [Cucurbita pepo subsp. pepo]

1.8e-78

81.22

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+E+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI
        SFQAAVAAQS +L E++E+TPPAP AQEKA VR+ETP TR PSMII+VKPQAKKARIEPRSPEKA          + E SES  T ++  DRP EAA TI
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CR24 protein FAM192A

2.9e-79

81.69

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-
        SFQAAVAAQS +L+E++E+TPPAP AQEKASVRRETP +R PSMII+VKPQAKKARIEPRSP+ A          + EPS+S +T ++  DRP EAA I 
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5A7U2Y6 Protein FAM192A

2.9e-79

81.69

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-
        SFQAAVAAQS +L+E++E+TPPAP AQEKASVRRETP +R PSMII+VKPQAKKARIEPRSP+ A          + EPS+S +T ++  DRP EAA I 
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5D3BGC9 Protein FAM192A

2.9e-79

81.69

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-
        SFQAAVAAQS +L+E++E+TPPAP AQEKASVRRETP +R PSMII+VKPQAKKARIEPRSP+ A          + EPS+S +T ++  DRP EAA I 
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1CXV7 protein FAM192A

2.6e-96

98.02

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEETRNSIGDRPHEAATIGLVSYSDESED
        SFQAAVAAQSTMLHELKEVTPPAPTAQEK SVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESE+T NSIGDRPHEAATIGLVSYS ESED
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEETRNSIGDRPHEAATIGLVSYSDESED

Query:  ED
        ED
Subjt:  ED

A0A6J1JZC4 protein FAM192A

5.0e-79

81.22

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+E+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI
        SFQAAVAAQS +L+E++E+TPPAP AQEKA VR+ETP TR PSMII+VKPQAKKARIEPRSPEKA          + E SES  T ++  DRP EAA TI
Subjt:  SFQAAVAAQSTMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKA----------SNEPSESEETRNSIGDRPHEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G62140.1 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

2.9e-55

60.75

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR
        M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR L+EILKENKDK+DAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQ+A+ E+E+LR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELR

Query:  SFQAAVAAQSTMLHELKE--VTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIE-------PRSPEKASN-EPSESEETRNSIGDRPHEAATIG
        +FQAAVAA+S +LHE KE  + PPAP  +E+  + +  PATR    IIKVKPQ KKA+         P + + AS+ + +  +  + ++  +  E    G
Subjt:  SFQAAVAAQSTMLHELKE--VTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIE-------PRSPEKASN-EPSESEETRNSIGDRPHEAATIG

Query:  --LVSYSDESEDED
          LVSYSDESED+D
Subjt:  --LVSYSDESEDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGACGAATCTGGGCGAGCAATTAGGCTGATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAAGACGGCACTGCTCA
AAGAGACAGACCCCTCTTCGAGATTCTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAAGCTCTGGATGAGGATGAGA
CAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAAGAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCT
ACTATGTTGCATGAACTGAAGGAAGTAACCCCGCCTGCTCCCACAGCTCAGGAAAAGGCATCAGTTAGGAGAGAAACTCCAGCCACTCGAGCACCGAGTATGATTATTAA
AGTAAAGCCACAGGCAAAGAAAGCGAGAATCGAACCTAGAAGCCCAGAAAAAGCTTCAAATGAGCCTTCAGAGTCAGAAGAAACACGTAATAGCATTGGTGATAGACCTC
ATGAAGCTGCTACGATAGGACTCGTTTCATACAGTGATGAAAGTGAAGATGAAGAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELRSFQAAVAAQS
TMLHELKEVTPPAPTAQEKASVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEETRNSIGDRPHEAATIGLVSYSDESEDED

MS018763 (gene) of Bitter gourd (TR) v1 genome