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MS018775 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018775
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin
Genome locationscaffold313:1880966..1881145
RNA-Seq ExpressionMS018775
SyntenyMS018775
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601912.1 hypothetical protein SDJN03_07145, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2689.83Show/hide
Query:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        G GMAPM  E RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

XP_022146369.1 defensin-like protein 2 [Momordica charantia]2.5e-2896.67Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGG CRGFRRRCFCTKHCL
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

XP_022922106.1 defensin J1-2-like [Cucurbita moschata]6.7e-2689.83Show/hide
Query:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        G+GMAPM  E RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

XP_022990903.1 defensin J1-2-like [Cucurbita maxima]3.0e-2690Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GMAPM  E RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

XP_023517597.1 defensin J1-2-like [Cucurbita pepo subsp. pepo]1.1e-2586.67Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GMAPM  E RTCES S HF+GLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

TrEMBL top hitse value%identityAlignment
A0A0A0KJ50 Knot1 domain-containing protein2.1e-2586.67Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GM PMV E RTCES S  FKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

A0A6J1CXX5 defensin-like protein 21.2e-2896.67Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGG CRGFRRRCFCTKHCL
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

A0A6J1E380 defensin J1-2-like3.2e-2689.83Show/hide
Query:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        G+GMAPM  E RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  GAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

A0A6J1JUM8 defensin J1-2-like1.5e-2690Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        LG GMAPM  E RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

V5LEQ8 Defensin-like protein 17.2e-2686.67Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL
        L  GM PMV + RTCES SRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC+
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL

SwissProt top hitse value%identityAlignment
O65740 Defensin J1-22.7e-2284.62Show/hide
Query:  MVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        MVAE RTCESQS  FKGLCFSK+NCG VC TEGF+GGHCRGFRRRCFCT+HC
Subjt:  MVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

P82659 Defensin SD21.3e-1667.92Show/hide
Query:  PMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        P+V E RTCESQS  FKG C S  NC +VC +E F GG CRGFRRRCFCT HC
Subjt:  PMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q39182 Defensin-like protein 21.1e-1864.41Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTCESQS  FKG C S +NC +VC  EGF GG+CRGFRRRCFCT+HC
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q41914 Defensin-like protein 41.0e-1661.02Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTC SQS+ FKG C S  NC +VC  EGF GG CRGFRRRCFCT++C
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q9ZUL7 Defensin-like protein 11.2e-1761.02Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTCES+S  FKG C S +NC +VC  EGF GG CRGFRRRC+CT+HC
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 661.8e-1352.54Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        L   M  +  E RTCE+ S  F G C S +NC +VC  EGF  G CRGFRRRC CT+ C
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02100.1 low-molecular-weight cysteine-rich 697.6e-2064.41Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTCESQS  FKG C S +NC +VC  EGF GG+CRGFRRRCFCT+HC
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein7.1e-1861.02Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTC SQS+ FKG C S  NC +VC  EGF GG CRGFRRRCFCT++C
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02130.1 low-molecular-weight cysteine-rich 688.4e-1961.02Show/hide
Query:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  GM P+  E RTCES+S  FKG C S +NC +VC  EGF GG CRGFRRRC+CT+HC
Subjt:  LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein9.6e-1561.22Show/hide
Query:  EGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        EGRTC+S+S HFK +C S +NC  VC+ EGF GG C GF RRC+CT+ C
Subjt:  EGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGGAGCAGGAATGGCGCCGATGGTTGCAGAGGGAAGGACATGCGAGTCTCAGAGCCGGCACTTCAAGGGGCTATGCTTTAGTAAGAACAACTGTGGCCATGTCTGCAA
AACGGAGGGCTTCCACGGCGGCCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGTCTT
mRNA sequenceShow/hide mRNA sequence
TTGGGAGCAGGAATGGCGCCGATGGTTGCAGAGGGAAGGACATGCGAGTCTCAGAGCCGGCACTTCAAGGGGCTATGCTTTAGTAAGAACAACTGTGGCCATGTCTGCAA
AACGGAGGGCTTCCACGGCGGCCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGTCTT
Protein sequenceShow/hide protein sequence
LGAGMAPMVAEGRTCESQSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCL