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MS018776 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018776
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin-like protein
Genome locationscaffold313:1885224..1885445
RNA-Seq ExpressionMS018776
SyntenyMS018776
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151187.1 defensin Ec-AMP-D2 [Cucumis sativus]9.1e-2586.67Show/hide
Query:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        FG+GMAPMVAEARVCE+PSHNFKGLCFS TNC N+CKTE F GG CRGFRRRCFCTKHCV
Subjt:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

XP_008466730.2 PREDICTED: defensin J1-2-like, partial [Cucumis melo]5.0e-2381.36Show/hide
Query:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        G GM PMV EAR CE+PSH FKGLCFS  NC +VCKTE FHGGHCRGFRRRCFCTKHCV
Subjt:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

XP_016898837.1 PREDICTED: defensin Ec-AMP-D2-like [Cucumis melo]1.2e-2486.67Show/hide
Query:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        FG GMAPMVAEARVCE+PSHNFKGLCFS TNC N+CKTE F GG CRGFRRRCFCTKHCV
Subjt:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

XP_022146323.1 defensin J1-2-like [Momordica charantia]2.2e-2698.21Show/hide
Query:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        MAPMVAEARVCETPSHNFKG CFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
Subjt:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

XP_022146324.1 defensin Ec-AMP-D2-like [Momordica charantia]7.4e-2791.67Show/hide
Query:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        FG GMAPMVAEARVCE+ SHNFKGLCFSGTNCA+VCKTE FHGGHCRGFRRRCFCTKHCV
Subjt:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

TrEMBL top hitse value%identityAlignment
A0A0A0KJ50 Knot1 domain-containing protein2.4e-2381.36Show/hide
Query:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        G GM PMV EAR CE+PSH FKGLCFS  NC +VCKTE FHGGHCRGFRRRCFCTKHCV
Subjt:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

A0A1S3CRW6 defensin J1-2-like2.4e-2381.36Show/hide
Query:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        G GM PMV EAR CE+PSH FKGLCFS  NC +VCKTE FHGGHCRGFRRRCFCTKHCV
Subjt:  GAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

A0A1S4DS60 defensin Ec-AMP-D2-like5.8e-2586.67Show/hide
Query:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        FG GMAPMVAEARVCE+PSHNFKGLCFS TNC N+CKTE F GG CRGFRRRCFCTKHCV
Subjt:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

A0A6J1CXT2 defensin Ec-AMP-D2-like3.6e-2791.67Show/hide
Query:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        FG GMAPMVAEARVCE+ SHNFKGLCFSGTNCA+VCKTE FHGGHCRGFRRRCFCTKHCV
Subjt:  FGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

A0A6J1CYA3 defensin J1-2-like1.0e-2698.21Show/hide
Query:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
        MAPMVAEARVCETPSHNFKG CFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV
Subjt:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV

SwissProt top hitse value%identityAlignment
O65740 Defensin J1-22.4e-2076.92Show/hide
Query:  MVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        MVAEAR CE+ SH FKGLCFS +NC +VC TE F+GGHCRGFRRRCFCT+HC
Subjt:  MVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

P82659 Defensin SD21.7e-1871.7Show/hide
Query:  PMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        P+V EAR CE+ SH FKG C S TNCANVC +E F GG CRGFRRRCFCT HC
Subjt:  PMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

Q39182 Defensin-like protein 24.5e-1967.86Show/hide
Query:  GMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        GM P+  EAR CE+ SH FKG C S +NCANVC  E F GG+CRGFRRRCFCT+HC
Subjt:  GMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

Q41914 Defensin-like protein 41.6e-1656.06Show/hide
Query:  LFNKIGWFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        LF  + +   GM P+  EAR C + S  FKG C S TNC NVC  E F GG CRGFRRRCFCT++C
Subjt:  LFNKIGWFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

Q9ZUL7 Defensin-like protein 16.6e-1861.67Show/hide
Query:  WFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        +   GM P+  EAR CE+ SH FKG C S  NCANVC  E F GG CRGFRRRC+CT+HC
Subjt:  WFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 662.6e-1458.18Show/hide
Query:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        M  +  EAR CET S+ F G C S +NCANVC  E F  G CRGFRRRC CT+ C
Subjt:  MAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

AT2G02100.1 low-molecular-weight cysteine-rich 693.2e-2067.86Show/hide
Query:  GMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        GM P+  EAR CE+ SH FKG C S +NCANVC  E F GG+CRGFRRRCFCT+HC
Subjt:  GMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein1.1e-1756.06Show/hide
Query:  LFNKIGWFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        LF  + +   GM P+  EAR C + S  FKG C S TNC NVC  E F GG CRGFRRRCFCT++C
Subjt:  LFNKIGWFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

AT2G02130.1 low-molecular-weight cysteine-rich 684.7e-1961.67Show/hide
Query:  WFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        +   GM P+  EAR CE+ SH FKG C S  NCANVC  E F GG CRGFRRRC+CT+HC
Subjt:  WFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein1.1e-1255.1Show/hide
Query:  EARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC
        E R C++ SH+FK +C S  NCA VC+ E F GG C GF RRC+CT+ C
Subjt:  EARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAAACTGAAAGAGGGGAATTATTTAACAAAATAGGTTGGTTTGGTGCAGGGATGGCGCCGATGGTTGCAGAGGCGAGGGTTTGTGAAACTCCGAGCCACAACTTTAA
GGGGCTGTGCTTTAGTGGGACGAACTGCGCCAATGTGTGCAAGACAGAGAGCTTCCACGGCGGCCACTGCAGGGGCTTCCGCCGCCGGTGCTTCTGCACAAAGCACTGCG
TT
mRNA sequenceShow/hide mRNA sequence
ATTGAAACTGAAAGAGGGGAATTATTTAACAAAATAGGTTGGTTTGGTGCAGGGATGGCGCCGATGGTTGCAGAGGCGAGGGTTTGTGAAACTCCGAGCCACAACTTTAA
GGGGCTGTGCTTTAGTGGGACGAACTGCGCCAATGTGTGCAAGACAGAGAGCTTCCACGGCGGCCACTGCAGGGGCTTCCGCCGCCGGTGCTTCTGCACAAAGCACTGCG
TT
Protein sequenceShow/hide protein sequence
IETERGELFNKIGWFGAGMAPMVAEARVCETPSHNFKGLCFSGTNCANVCKTESFHGGHCRGFRRRCFCTKHCV