; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRHOMBOID-like protein 10, chloroplastic
Genome locationscaffold238:204434..212554
RNA-Seq ExpressionMS018794
SyntenyMS018794
Gene Ontology termsGO:0006465 - signal peptide processing (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031969 - chloroplast membrane (cellular component)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR022764 - Peptidase S54, rhomboid domain
IPR035952 - Rhomboid-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011445.1 RHOMBOID-like protein 10, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-12980.76Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRITHH+ L F  +SF KK APL ++SSK+K AWC RALHFPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWTNILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII++NMAIG+MS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

XP_022155015.1 RHOMBOID-like protein 10, chloroplastic [Momordica charantia]2.0e-16098.62Show/hide
Query:  MVANYGATPLGFPLFLEPTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF
        MVANYGATPLGFPL+LEPTPVDLFATAASLRLGRLLRRRITHHL L FTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF
Subjt:  MVANYGATPLGFPLFLEPTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF

Query:  LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV
        LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV
Subjt:  LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV

Query:  EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLR IAHIILLNMAIGMMSTGIDNWGH
Subjt:  EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

XP_022963855.1 RHOMBOID-like protein 10, chloroplastic [Cucurbita moschata]2.4e-12980.76Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRITHH+ L F  +SF KK APL ++SSK+K AWC RAL FPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWT ILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII+LNMAIGMMS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

XP_022967604.1 RHOMBOID-like protein 10, chloroplastic [Cucurbita maxima]3.1e-12980.41Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRI HH+ L F  +SF KK APL ++SSK+K AWC R LHFPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWTNILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII+LNMAIG+MS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

XP_023511751.1 RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo]2.4e-12980.41Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRITHH+ L F  +SF KK APL ++ SK+K AWC RALHFPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWTNILL VNIL +LAQVAS+GKLLLWG+KIN LID+GQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII+LNMAIG+MS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

TrEMBL top hitse value%identityAlignment
A0A371EEG9 RHOMBOID-like protein 10, chloroplastic1.2e-9164.1Show/hide
Query:  PTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLF-GGGKTGNSLRNERK
        P P+DL ATAA L  G LLRRR THHLRL    +SF KK APL+ +  ++KD WC R L   GLN+L+ S   ++S+ S  L  F GGG  G+   N   
Subjt:  PTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLF-GGGKTGNSLRNERK

Query:  SDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFAS
        S+ K S ++P N ++WT ILL  N+L Y+AQ+A+QGKLLLWGAKIN LIDQGQLWRL TSSFLHANIGHL+VNCYSLNS+GP VE   G RRFLAVYF S
Subjt:  SDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFAS

Query:  AIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AIASS+ SYWFC  P+VGASGAIFGLVGS AVFV+RH+ LVG GKEDL+ IA +I LNMAIG++S GIDNWGH
Subjt:  AIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

A0A6J1DL86 RHOMBOID-like protein 10, chloroplastic9.7e-16198.62Show/hide
Query:  MVANYGATPLGFPLFLEPTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF
        MVANYGATPLGFPL+LEPTPVDLFATAASLRLGRLLRRRITHHL L FTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF
Subjt:  MVANYGATPLGFPLFLEPTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLF

Query:  LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV
        LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV
Subjt:  LFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAV

Query:  EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLR IAHIILLNMAIGMMSTGIDNWGH
Subjt:  EKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

A0A6J1HJ61 RHOMBOID-like protein 10, chloroplastic1.2e-12980.76Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRITHH+ L F  +SF KK APL ++SSK+K AWC RAL FPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWT ILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII+LNMAIGMMS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

A0A6J1HX69 RHOMBOID-like protein 10, chloroplastic1.5e-12980.41Show/hide
Query:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC
        MV + GA PLGFPLFLEPT  P+DLFATA SLRL   LRRRI HH+ L F  +SF KK APL ++SSK+K AWC R LHFPGLNFLEVSKDI+SS ++AC
Subjt:  MVANYGATPLGFPLFLEPT--PVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSAC

Query:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
        L+ FGGG TG+SL+NE  S WKTSNRNP N++RWTNILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP
Subjt:  LFLFGGGKTGNSLRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGP

Query:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        AVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGAIFGLVGSFA FVVRHRKLVGRG EDL+ IAHII+LNMAIG+MS GIDNWGH
Subjt:  AVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

A0A7N2RCU7 Rhomboid domain-containing protein1.5e-9261.59Show/hide
Query:  PTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYS----FHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLRN
        PT ++L  TA    +G LL+ R++HHLRL F  +S    F KK + L  +  ++KD WC + L F   NFL++SKD +++ YS C   F GG+T     N
Subjt:  PTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYS----FHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLRN

Query:  ERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVY
        +R S  K S+RN  N +RWTNILLAVN+L ++AQ A+QG+L+LWGAKIN LID+GQ WRLVTSSFLHANIGHLMVNCYSLNS+GP+ E ISG RRFLAVY
Subjt:  ERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVY

Query:  FASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        FASAI+SS +SYWFC AP+VGASGAIFGL+G+ AVF  RHR+LVGRGKEDL+ IA +I+LNM IG+ S GIDNWGH
Subjt:  FASAIASSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

SwissProt top hitse value%identityAlignment
F4ICF4 RHOMBOID-like protein 10, chloroplastic4.5e-7053.82Show/hide
Query:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT
        FATAAS+         ++ HLRL F   S  KK    +D  +++K A   R   F G NFL+   DI  S  S  +  F GG++  + R   E  S+ +T
Subjt:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT

Query:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA--
        S RN +N +RWTN+LLA+N++ Y+AQ+AS GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+A  
Subjt:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA--

Query:  -----SSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
              S++SYWF  APSVGASGAIFGLVGS AVFV+RH+++V  G EDL QIA II LNMA+G+MS  IDNWGH
Subjt:  -----SSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

P54493 Rhomboid protease GluP1.3e-2139.26Show/hide
Query:  WTNILLAVNILTYLAQVASQGK-----LLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYW
        +T + +A+ IL +     + G      L+ +GAK N LI QG+ WRL+T   LH  I HL  N  +L S+G AVE++ G+ RFL +Y A+ I  S  S+ 
Subjt:  WTNILLAVNILTYLAQVASQGK-----LLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYW

Query:  FCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        F   PS GASGAIFG +G+     + +RK+  R       I  II++N+  G   + IDN GH
Subjt:  FCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

P96617 Putative rhomboid protease YdcA5.5e-1230.19Show/hide
Query:  LLAVNILTYLAQVASQGKLLLWGAKINGL---IDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWF--CNA
        +LA+  + +L        ++LW   + G    +  G+ WRL+T   LHA   HL+ N  S+    PA+E++ G  RFL VY  S I  +  +Y     + 
Subjt:  LLAVNILTYLAQVASQGKLLLWGAKINGL---IDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWF--CNA

Query:  PSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
          VGASGAIFGL G +   V+   +L+  G+E  + I  ++   + +  +++ I+   H
Subjt:  PSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

Q695U0 Rhomboid-like protease 15.9e-1432.1Show/hide
Query:  WTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASS--SVSYWFCN
        W   ++ V + T L  + +   L+ +GA    LI QGQ+WRL+   FLHAN  H+  N +    +G  +E+  G  +F  +YFASAI  +  S + +FCN
Subjt:  WTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASS--SVSYWFCN

Query:  APSVGASGAIFGLVG-SFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTG-IDNWGH
        +  VGAS A FGL+G       +   ++  R +     ++ ++L+ + +  ++ G ID  GH
Subjt:  APSVGASGAIFGLVG-SFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTG-IDNWGH

Q9FFX0 RHOMBOID-like protein 9, chloroplastic2.9e-1332.73Show/hide
Query:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS
        +IL ++N+   L + A      + G L   LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y    ++ + +S
Subjt:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS

Query:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW
        +     P+VG +G  F L+G++ V   ++++++   + EDL Q A II+    + +   G ID+W
Subjt:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW

Arabidopsis top hitse value%identityAlignment
AT1G25290.1 RHOMBOID-like protein 103.2e-7153.82Show/hide
Query:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT
        FATAAS+         ++ HLRL F   S  KK    +D  +++K A   R   F G NFL+   DI  S  S  +  F GG++  + R   E  S+ +T
Subjt:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT

Query:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA--
        S RN +N +RWTN+LLA+N++ Y+AQ+AS GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+A  
Subjt:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA--

Query:  -----SSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
              S++SYWF  APSVGASGAIFGLVGS AVFV+RH+++V  G EDL QIA II LNMA+G+MS  IDNWGH
Subjt:  -----SSSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

AT1G25290.2 RHOMBOID-like protein 108.9e-7455.6Show/hide
Query:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT
        FATAAS+         ++ HLRL F   S  KK    +D  +++K A   R   F G NFL+   DI  S  S  +  F GG++  + R   E  S+ +T
Subjt:  FATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLR--NERKSDWKT

Query:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASS
        S RN +N +RWTN+LLA+N++ Y+AQ+AS GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+ASS
Subjt:  SNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASS

Query:  SVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
        ++SYWF  APSVGASGAIFGLVGS AVFV+RH+++V  G EDL QIA II LNMA+G+MS  IDNWGH
Subjt:  SVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

AT1G52580.1 RHOMBOID-like protein 53.3e-1234.06Show/hide
Query:  GAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWFC------NAPSVGASGAIFGLVGSFAVFVV
        GA    L+++G+ WRL++  +LH    HLM N  SL  IG  +E+  G  R  A+Y  S +  S VS   C         SVGASGA+FGL+G+    ++
Subjt:  GAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWFC------NAPSVGASGAIFGLVGSFAVFVV

Query:  RHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH
         +  +       L  +  II+LN+++G +   +DN  H
Subjt:  RHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH

AT5G38510.1 Rhomboid-related intramembrane serine protease family protein2.1e-1432.73Show/hide
Query:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS
        +IL ++N+   L + A      + G L   LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y    ++ + +S
Subjt:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS

Query:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW
        +     P+VG +G  F L+G++ V   ++++++   + EDL Q A II+    + +   G ID+W
Subjt:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW

AT5G38510.2 Rhomboid-related intramembrane serine protease family protein2.1e-1432.73Show/hide
Query:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS
        +IL ++N+   L + A      + G L   LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y    ++ + +S
Subjt:  NILLAVNILTYLAQVA------SQGKL---LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVS

Query:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW
        +     P+VG +G  F L+G++ V   ++++++   + EDL Q A II+    + +   G ID+W
Subjt:  YWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGK-EDLRQIAHIILLNMAIGMMSTG-IDNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAAATTATGGCGCCACACCTTTGGGCTTTCCTTTATTCCTGGAACCCACCCCCGTTGATCTCTTTGCAACCGCCGCTTCTCTCCGTCTCGGCCGCCTCCTCCG
CCGCCGTATTACCCATCACCTCCGCCTTTGCTTCACTCACTATTCCTTCCATAAGAAATTTGCTCCCCTTAATGACATCTCTTCTAAAGTGAAGGATGCATGGTGTCCAA
GAGCTCTCCATTTTCCAGGATTAAATTTTCTTGAAGTATCTAAGGATATTATATCATCCAATTATTCTGCTTGTTTGTTTCTCTTTGGTGGCGGGAAAACTGGGAACAGC
TTAAGAAATGAGCGGAAATCTGACTGGAAAACTTCAAATAGAAATCCACTGAACAATCAAAGATGGACCAATATTCTTCTTGCTGTTAATATTTTAACTTACCTGGCACA
AGTCGCCTCACAAGGAAAGTTACTCCTATGGGGAGCTAAGATAAATGGGCTAATTGATCAAGGACAACTATGGAGGCTGGTCACGTCTTCTTTTTTGCATGCAAATATTG
GGCACTTGATGGTTAACTGTTATTCTTTAAATTCTATTGGTCCTGCGGTGGAGAAAATCTCTGGTACTCGGAGATTTCTTGCAGTGTACTTTGCCTCAGCAATTGCAAGT
TCATCAGTGAGTTATTGGTTCTGCAACGCACCTTCGGTTGGTGCATCTGGAGCAATCTTTGGATTGGTTGGATCCTTTGCTGTGTTTGTTGTGAGACATAGGAAACTGGT
TGGTAGGGGCAAAGAAGATCTTCGACAAATCGCTCATATTATTCTTTTAAATATGGCTATTGGGATGATGTCCACAGGCATCGATAACTGGGGACAC
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAAATTATGGCGCCACACCTTTGGGCTTTCCTTTATTCCTGGAACCCACCCCCGTTGATCTCTTTGCAACCGCCGCTTCTCTCCGTCTCGGCCGCCTCCTCCG
CCGCCGTATTACCCATCACCTCCGCCTTTGCTTCACTCACTATTCCTTCCATAAGAAATTTGCTCCCCTTAATGACATCTCTTCTAAAGTGAAGGATGCATGGTGTCCAA
GAGCTCTCCATTTTCCAGGATTAAATTTTCTTGAAGTATCTAAGGATATTATATCATCCAATTATTCTGCTTGTTTGTTTCTCTTTGGTGGCGGGAAAACTGGGAACAGC
TTAAGAAATGAGCGGAAATCTGACTGGAAAACTTCAAATAGAAATCCACTGAACAATCAAAGATGGACCAATATTCTTCTTGCTGTTAATATTTTAACTTACCTGGCACA
AGTCGCCTCACAAGGAAAGTTACTCCTATGGGGAGCTAAGATAAATGGGCTAATTGATCAAGGACAACTATGGAGGCTGGTCACGTCTTCTTTTTTGCATGCAAATATTG
GGCACTTGATGGTTAACTGTTATTCTTTAAATTCTATTGGTCCTGCGGTGGAGAAAATCTCTGGTACTCGGAGATTTCTTGCAGTGTACTTTGCCTCAGCAATTGCAAGT
TCATCAGTGAGTTATTGGTTCTGCAACGCACCTTCGGTTGGTGCATCTGGAGCAATCTTTGGATTGGTTGGATCCTTTGCTGTGTTTGTTGTGAGACATAGGAAACTGGT
TGGTAGGGGCAAAGAAGATCTTCGACAAATCGCTCATATTATTCTTTTAAATATGGCTATTGGGATGATGTCCACAGGCATCGATAACTGGGGACAC
Protein sequenceShow/hide protein sequence
MVANYGATPLGFPLFLEPTPVDLFATAASLRLGRLLRRRITHHLRLCFTHYSFHKKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNS
LRNERKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIAS
SSVSYWFCNAPSVGASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRQIAHIILLNMAIGMMSTGIDNWGH