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MS018808 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018808
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0426 protein At1g28150, chloroplastic
Genome locationscaffold14:37760..37936
RNA-Seq ExpressionMS018808
SyntenyMS018808
Gene Ontology termsNA
InterPro domainsIPR040278 - UPF0426 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020036.1 UPF0426 protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
XP_022137739.1 UPF0426 protein At1g28150, chloroplastic [Momordica charantia]6.8e-2398.31Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHT+ASAAEDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]4.3e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
XP_023000721.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita maxima]4.3e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
XP_023518976.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]4.3e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
TrEMBL top hitse value%identityAlignment
A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic3.5e-1784.75Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAG+TEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
A0A5D3BGH6 UPF0426 protein3.5e-1784.75Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAG+TEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
A0A6J1C844 UPF0426 protein At1g28150, chloroplastic3.3e-2398.31Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHT+ASAAEDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic2.1e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic2.1e-1786.44Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        EPVAFAGGLFAGLLRLDLNE+PLKEWVK+TVESAGITEE D  TQ S  EDGPTEIEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
SwissProt top hitse value%identityAlignment
P74786 UPF0426 protein ssl02941.9e-0435.59Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
        +P+AFAGG  +G+LRL L ++PLK+W+++     G+T+        +A ++ P  I+I+
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE
Q9FZ89 UPF0426 protein At1g28150, chloroplastic7.1e-1568.33Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEED-DTHTQASAAEDGPTEIEIE
        EP+AF GG+FAGLLRLDLNEEPLK+WV RTVE++GITEE+ D     S  ED P +IEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEED-DTHTQASAAEDGPTEIEIE
Arabidopsis top hitse value%identityAlignment
AT1G28150.1 unknown protein5.0e-1668.33Show/hide
Query:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEED-DTHTQASAAEDGPTEIEIE
        EP+AF GG+FAGLLRLDLNEEPLK+WV RTVE++GITEE+ D     S  ED P +IEIE
Subjt:  EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEED-DTHTQASAAEDGPTEIEIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCCAGTTGCCTTCGCAGGTGGGCTATTTGCTGGACTGCTAAGGCTTGATTTGAACGAAGAACCACTAAAGGAATGGGTCAAGAGGACAGTGGAATCTGCTGGAATCAC
AGAAGAAGATGACACTCACACTCAAGCATCTGCAGCAGAGGATGGCCCAACTGAGATTGAGATTGAA
mRNA sequenceShow/hide mRNA sequence
GAGCCAGTTGCCTTCGCAGGTGGGCTATTTGCTGGACTGCTAAGGCTTGATTTGAACGAAGAACCACTAAAGGAATGGGTCAAGAGGACAGTGGAATCTGCTGGAATCAC
AGAAGAAGATGACACTCACACTCAAGCATCTGCAGCAGAGGATGGCCCAACTGAGATTGAGATTGAA
Protein sequenceShow/hide protein sequence
EPVAFAGGLFAGLLRLDLNEEPLKEWVKRTVESAGITEEDDTHTQASAAEDGPTEIEIE