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MS018822 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018822
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNucleotid_trans domain-containing protein
Genome locationscaffold14:140468..140821
RNA-Seq ExpressionMS018822
SyntenyMS018822
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137395.2 uncharacterized protein LOC101213981 [Cucumis sativus]4.2e-4885.59Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP++GAKGGRLTFKGGVLASRSK IDKKKKKKKKDKS++D+NPTD+ EIL+ AD V+ GDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTKFKS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VE+ALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
XP_008438568.1 PREDICTED: uncharacterized protein LOC103483601 [Cucumis melo]5.5e-4885.59Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP+AGAKGGRLTFKGGVLASRSK IDKKKKKKKKDK+++D+NPTD+ EIL+ AD V+GGDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTK KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VE+ALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
XP_022137706.1 uncharacterized protein LOC111009076 [Momordica charantia]3.9e-5497.5Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK--DKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF
        MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK  DKSRSDDNPTDETEILS ADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK--DKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK
XP_023001360.1 uncharacterized protein LOC111495520 [Cucurbita maxima]5.0e-4988.14Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP++GAKGGRLTFKGGVLASRSK IDKKKKKKKKDKS+SD+NPTDETEILS AD V+G +G VYTIDAAKRMKYEELFPVET+KFGYDPNN++TKFKS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VEEALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
XP_038893643.1 uncharacterized protein LOC120082512 [Benincasa hispida]1.3e-4988.14Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP+AG KGGRLTFKGGVLASRSK IDKKKKKKKKDKS++++NPTDE EILS AD V+GGDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTKFKS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VEEALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
TrEMBL top hitse value%identityAlignment
A0A0A0LVD6 Uncharacterized protein2.0e-4885.59Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP++GAKGGRLTFKGGVLASRSK IDKKKKKKKKDKS++D+NPTD+ EIL+ AD V+ GDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTKFKS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VE+ALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
A0A1S3AWC8 uncharacterized protein LOC1034836012.7e-4885.59Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP+AGAKGGRLTFKGGVLASRSK IDKKKKKKKKDK+++D+NPTD+ EIL+ AD V+GGDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTK KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VE+ALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
A0A5A7SXI8 Uncharacterized protein2.7e-4885.59Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP+AGAKGGRLTFKGGVLASRSK IDKKKKKKKKDK+++D+NPTD+ EIL+ AD V+GGDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTK KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VE+ALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
A0A6J1C7F9 uncharacterized protein LOC1110090761.9e-5497.5Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK--DKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF
        MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK  DKSRSDDNPTDETEILS ADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKK--DKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK
A0A6J1KIE4 uncharacterized protein LOC1114955202.4e-4988.14Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS
        MSDP++GAKGGRLTFKGGVLASRSK IDKKKKKKKKDKS+SD+NPTDETEILS AD V+G +G VYTIDAAKRMKYEELFPVET+KFGYDPNN++TKFKS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKS

Query:  VEEALDDRVKKKADRYCK
        VEEALDDRVKKKADRYCK
Subjt:  VEEALDDRVKKKADRYCK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25720.1 unknown protein5.3e-2555.37Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEIL---SLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTK
        MSDP+    GGRL FKGG LA+R K+I+KKKKKK+K      D   D  +     S   A   GD ++Y+IDAAK+ KY++LFPVE KKFGY P      
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEIL---SLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTK

Query:  FKSVEEALDDRVKKKADRYCK
        F+S E+ALDDRVKKKADRYCK
Subjt:  FKSVEEALDDRVKKKADRYCK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATCCATTTGCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTGGCCTCCCGCAGCAAGGCCATTGACAAGAAGAAGAAGAAGAAGAAGAAAGA
CAAAAGTAGAAGTGACGACAACCCCACGGACGAGACCGAAATTTTGTCGTTGGCTGATGCTGTAGATGGCGGCGACGGAGAAGTGTATACTATTGACGCGGCCAAGCGTA
TGAAGTACGAGGAGCTCTTCCCCGTGGAGACCAAGAAGTTCGGTTACGATCCCAATAACTCCAATACCAAGTTCAAGTCTGTGGAGGAAGCTCTCGATGACCGCGTCAAA
AAGAAGGCGGATCGTTACTGTAAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATCCATTTGCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTGGCCTCCCGCAGCAAGGCCATTGACAAGAAGAAGAAGAAGAAGAAGAAAGA
CAAAAGTAGAAGTGACGACAACCCCACGGACGAGACCGAAATTTTGTCGTTGGCTGATGCTGTAGATGGCGGCGACGGAGAAGTGTATACTATTGACGCGGCCAAGCGTA
TGAAGTACGAGGAGCTCTTCCCCGTGGAGACCAAGAAGTTCGGTTACGATCCCAATAACTCCAATACCAAGTTCAAGTCTGTGGAGGAAGCTCTCGATGACCGCGTCAAA
AAGAAGGCGGATCGTTACTGTAAA
Protein sequenceShow/hide protein sequence
MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKKKDKSRSDDNPTDETEILSLADAVDGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKSVEEALDDRVK
KKADRYCK