CuGenDBv2

Gene ID	MS018824
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Xyloglucan endotransglucosylase/hydrolase
Genome location	scaffold14:148061..148453
RNA-Seq Expression	MS018824
Synteny	MS018824
Gene Ontology terms	GO:0006073 - cellular glucan metabolic process (biological process) GO:0071554 - cell wall organization or biogenesis (biological process) GO:0071840 - cellular component organization or biogenesis (biological process) GO:0005576 - extracellular region (cellular component) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR000757 - Glycoside hydrolase family 16 IPR008263 - Glycoside hydrolase, family 16, active site IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily IPR044791 - Beta-glucanase/XTH

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607413.1 Xyloglucan endotransglucosylase/hydrolase protein 9, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-36

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DSAGT TAF ++       + + ++EGP+HDELDFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

KAG7037079.1 Xyloglucan endotransglucosylase/hydrolase protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-34

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DSAGT TAF +            ++EGPNHDE+DFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

XP_004137572.1 xyloglucan endotransglucosylase/hydrolase protein 9 [Cucumis sativus]

1.8e-34

71.05

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        S+SGCGYESKKKYLFG  +VQIKLVE DSAG  TAF +            S+EGPNHDELDFEFLGNVSG PYLVQTNVY NGTG+R       FDPTAD
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FH+YSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

XP_022948524.1 xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita moschata]

6.3e-35

71.05

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DSAGT TAF +            ++EGPNHDELDFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

XP_022998702.1 xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita maxima]

1.4e-34

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DS+GT TAF +            ++EGPNHDELDFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SXW9 Xyloglucan endotransglucosylase/hydrolase

7.5e-34

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        S+SGCGYESKKKYLFG  +VQIKLVE DSAG  TAF +            S+EGPNHDELDFEFLGNVSG PYLVQTNVY NGTG+R       FDPTAD
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FH+YSLFWNR SIV
Subjt:  FHTYSLFWNRHSIV

A0A5D3BIN6 Xyloglucan endotransglucosylase/hydrolase

7.5e-34

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        S+SGCGYESKKKYLFG  +VQIKLVE DSAG  TAF +            S+EGPNHDELDFEFLGNVSG PYLVQTNVY NGTG+R       FDPTAD
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FH+YSLFWNR SIV
Subjt:  FHTYSLFWNRHSIV

A0A6J1GA53 Xyloglucan endotransglucosylase/hydrolase

3.0e-35

71.05

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DSAGT TAF +            ++EGPNHDELDFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

A0A6J1K8P7 Xyloglucan endotransglucosylase/hydrolase

6.8e-35

70.18

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        SVSGCG+ESKKKYLFG+ SVQIKLVE DS+GT TAF +            ++EGPNHDELDFEFLGN+SG PYLVQTNVY NGTG+R       FDPT D
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FHTYSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

N0DX39 Xyloglucan endotransglucosylase/hydrolase

8.9e-35

71.05

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Query:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD
        S+SGCGYESKKKYLFG  +VQIKLVE DSAG  TAF +            S+EGPNHDELDFEFLGNVSG PYLVQTNVY NGTG+R       FDPTAD
Subjt:  SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTAD

Query:  FHTYSLFWNRHSIV
        FH+YSLFWNRHSIV
Subjt:  FHTYSLFWNRHSIV

SwissProt top hits

e value

%identity

Alignment

P35694 Xyloglucan endotransglucosylase/hydrolase 2

8.9e-24

48.67

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Query:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF
        VSG G++SKK+YLFGR  +Q+KLV  +SAGT TA+ +            S++GP HDE+DFEFLGN+SG PY++ TN++  G G+R       FDPT +F
Subjt:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF

Query:  HTYSLFWNRHSIV
        HTYS+ W    I+
Subjt:  HTYSLFWNRHSIV

Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 25

1.7e-22

49.11

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Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        SG G+++KK+YLFG+  +Q+KLV  +SAGT TA+ +             ++G   DE+DFEFLGN++G PY + TNVY  G G R       FDPTADFH
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
        TYS+ WN H IV
Subjt:  TYSLFWNRHSIV

Q8L9A9 Probable xyloglucan endotransglucosylase/hydrolase protein 8

4.0e-24

49.11

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Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        +GCG+++K  Y FG  S+++KLV  DSAG  TA+     ++C      +  GP  DE+DFEFLGN +G PY++QTNVY NGTG+R       FDPT D+H
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
        TYS+ WN H +V
Subjt:  TYSLFWNRHSIV

Q8LDW9 Xyloglucan endotransglucosylase/hydrolase protein 9

1.2e-28

55.36

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Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        SG G+ES+ KYLFG+ S+QIKLVE DSAGT TAF +            S++GPNH+E DFEFLGN +G PY+VQTN+Y NG G+R       FDPT +FH
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
        TYS+ W++ S+V
Subjt:  TYSLFWNRHSIV

Q8LG58 Probable xyloglucan endotransglucosylase/hydrolase protein 16

1.5e-23

50.44

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Query:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF
        VSG G++SKK+YLFGR  +Q+KLV  +SAGT TA+ +            S+EGP HDE+DFEFLGN +G PY++ TNV+  G G+R       FDPT +F
Subjt:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF

Query:  HTYSLFWNRHSIV
        HTYSL W    I+
Subjt:  HTYSLFWNRHSIV

Arabidopsis top hits

e value

%identity

Alignment

AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8

2.8e-25

49.11

Show/hide

Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        +GCG+++K  Y FG  S+++KLV  DSAG  TA+     ++C      +  GP  DE+DFEFLGN +G PY++QTNVY NGTG+R       FDPT D+H
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
        TYS+ WN H +V
Subjt:  TYSLFWNRHSIV

AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16

1.1e-24

50.44

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Query:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF
        VSG G++SKK+YLFGR  +Q+KLV  +SAGT TA+ +            S+EGP HDE+DFEFLGN +G PY++ TNV+  G G+R       FDPT +F
Subjt:  VSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADF

Query:  HTYSLFWNRHSIV
        HTYSL W    I+
Subjt:  HTYSLFWNRHSIV

AT4G03210.1 xyloglucan endotransglucosylase/hydrolase 9

8.5e-30

55.36

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Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        SG G+ES+ KYLFG+ S+QIKLVE DSAGT TAF +            S++GPNH+E DFEFLGN +G PY+VQTN+Y NG G+R       FDPT +FH
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
        TYS+ W++ S+V
Subjt:  TYSLFWNRHSIV

AT4G03210.2 xyloglucan endotransglucosylase/hydrolase 9

1.2e-28

55.05

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Query:  GYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFHTYS
        G+ES+ KYLFG+ S+QIKLVE DSAGT TAF +            S++GPNH+E DFEFLGN +G PY+VQTN+Y NG G+R       FDPT +FHTYS
Subjt:  GYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFHTYS

Query:  LFWNRHSIV
        + W++ S+V
Subjt:  LFWNRHSIV

AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 7

1.2e-23

52.68

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Query:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH
        SGCG+ SKK+YLFGR S++IKL+  DSAGT TAF            M+S      DELDFEFLGN SG PY VQTNV+ +G G R       FDP+ DFH
Subjt:  SGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVY-NGTGSR------GFDPTADFH

Query:  TYSLFWNRHSIV
         Y++ WN   IV
Subjt:  TYSLFWNRHSIV

Sequences

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CDS sequence

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TCTGTTTCAGGTTGTGGGTATGAATCCAAGAAGAAGTATCTGTTCGGGAGAGGCAGTGTCCAAATCAAACTAGTCGAGGACGACTCTGCAGGGACAGCGACAGCATTCTC
TATACTGGGCTCATTTGTGTGTGTAAAATTACAGATGTCATCGGCGGAGGGGCCTAACCACGATGAGCTAGACTTTGAGTTTCTGGGAAATGTGTCGGGACACCCATATC
TGGTTCAGACCAATGTGTATAATGGCACGGGAAGCAGAGGGTTCGACCCCACTGCCGATTTCCACACCTATTCCCTCTTCTGGAACCGCCACTCTATCGTG

mRNA sequence

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Protein sequence

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SVSGCGYESKKKYLFGRGSVQIKLVEDDSAGTATAFSILGSFVCVKLQMSSAEGPNHDELDFEFLGNVSGHPYLVQTNVYNGTGSRGFDPTADFHTYSLFWNRHSIV

MS018824 (gene) of Bitter gourd (TR) v1 genome