; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018872 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018872
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucine-rich repeat (LRR) family protein
Genome locationscaffold89:24589..24870
RNA-Seq ExpressionMS018872
SyntenyMS018872
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598355.1 hypothetical protein SDJN03_08133, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4390.43Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL NRLSGCLPFEIGYL+KATVFDANSNILTGPIPQS GCL SL+ILNLANNQFYG IP+SLC LPDV+NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

XP_022131372.1 uncharacterized protein At4g06744-like [Momordica charantia]7.4e-48100Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

XP_022961677.1 uncharacterized protein At4g06744-like [Cucurbita moschata]3.2e-4390.43Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL NRLSGCLPFEIGYL+KATVFDANSNILTGPIPQS GCL SL+ILNLANNQFYG IP+SLC LPDV+NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

XP_023545662.1 uncharacterized protein At4g06744-like [Cucurbita pepo subsp. pepo]3.2e-4390.43Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL NRLSGCLPFEIGYL+KATVFDANSNILTGPIPQS GCL SL+ILNLANNQFYG IP+SLC LPDV+NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

XP_038886135.1 uncharacterized protein At4g06744-like [Benincasa hispida]1.9e-4389.36Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL+N+LSGCLPFEIGYL+KATVFDAN+NILTGPIPQSFGCL SLQILNLANNQFYG IP+SLC LPD++NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

TrEMBL top hitse value%identityAlignment
A0A5A7V561 LRR-family protein6.0e-4387.23Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTL EVLFL+NRL+GCLPFEIGYL+KATVFDAN+NILTGPIPQSFGCL SLQILNLA+NQFYGTIP+S+C LPD++NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

A0A6J1BQU3 uncharacterized protein At4g06744-like3.6e-48100Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

A0A6J1HAT4 uncharacterized protein At4g06744-like1.6e-4390.43Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL NRLSGCLPFEIGYL+KATVFDANSNILTGPIPQS GCL SL+ILNLANNQFYG IP+SLC LPDV+NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

A0A6J1K9E7 uncharacterized protein At4g06744-like1.6e-4390.43Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTLREVLFL NRLSGCLPFEIGYL+KATVFDANSNILTGPIPQS GCL SL+ILNLANNQFYG IP+SLC LPDV+NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

E5GB82 LRR-family protein6.0e-4387.23Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIPPTIGRAWRTL EVLFL+NRL+GCLPFEIGYL+KATVFDAN+NILTGPIPQSFGCL SLQILNLA+NQFYGTIP+S+C LPD++NITLSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

SwissProt top hitse value%identityAlignment
O48809 Leucine-rich repeat extensin-like protein 26.8e-2047.87Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G IP +IG   +TL E++   + L+GCLP +IG L   TVFD + N L+GP+P S G ++SL+ LN+ANN+F G IP S+C L ++ N T S+N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

O65375 Leucine-rich repeat extensin-like protein 16.8e-2048.94Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G IP +IG+  +TL E++   + L+GCLP +IG L K TVFD  SN L GP+P S G ++SL+ L++ANN F G IP S+C L ++ N T S+N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

Q8W3M4 Uncharacterized protein At4g067441.5e-1945.83Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSL--PDVFNITLSNN
        GP+P +I R+  TL EVLFL N  +GC+P EIG+L  A+V D   N LTGP+P S  CL  ++ LN A N  +G +P+++C L   ++ N++LS+N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSL--PDVFNITLSNN

Q9LUI1 Leucine-rich repeat extensin-like protein 61.1e-1743.48Show/hide
Query:  IPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        +PP+  +  +TL E++   ++L+GCL  EIG L + TVFD + N L G +P++ G ++SL+ LN+A+N+F G IP+S+C LP + N T S N
Subjt:  IPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

Q9SN46 Leucine-rich repeat extensin-like protein 51.6e-1644.68Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G IP ++G   R L E++F+EN  + CLP +IG L   TVFD + N L G +P S G + S++ LN+A+N+F G IP ++C LP + N T S N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 14.8e-2148.94Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G IP +IG+  +TL E++   + L+GCLP +IG L K TVFD  SN L GP+P S G ++SL+ L++ANN F G IP S+C L ++ N T S+N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

AT1G49750.1 Leucine-rich repeat (LRR) family protein4.1e-2858.51Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIP +IG   + L+EVLFL N+L+GCLP++IG L +ATVFD   N LTGPIP SFGCL +++ LNLA N+FYGTIP+ +C +  + N++LSNN
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

AT1G62440.1 leucine-rich repeat/extensin 24.8e-2147.87Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G IP +IG   +TL E++   + L+GCLP +IG L   TVFD + N L+GP+P S G ++SL+ LN+ANN+F G IP S+C L ++ N T S+N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

AT3G19320.1 Leucine-rich repeat (LRR) family protein3.5e-2758.51Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        GPIP +IG   ++L+EVLFL N+L+GCLP++IG L +ATVFD   N LTGPIP SFGCL+ ++ LNLA N FYGTIP+ +C L  + N++LS N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN

AT4G28380.1 Leucine-rich repeat (LRR) family protein3.7e-2148.94Show/hide
Query:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN
        G +PPTI R   TL E+L + + LSGCLP E+GYL K  V D + N L GP+P S   L  L+ LNL +N F GT+P  +C LP + N+T+S N
Subjt:  GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCCAATCCCGCCGACGATCGGCCGAGCATGGAGAACTCTAAGGGAGGTACTGTTTCTAGAAAACAGGCTCTCCGGTTGTCTGCCTTTCGAGATTGGGTATCTAATCAA
AGCCACCGTATTCGACGCCAACTCCAACATTCTGACGGGTCCAATACCCCAGTCTTTCGGCTGCTTACGGAGCCTACAAATTCTCAACTTGGCCAACAACCAATTCTACG
GAACCATCCCGGACTCACTCTGCAGCCTCCCGGACGTGTTCAACATAACTCTAAGCAACAAC
mRNA sequenceShow/hide mRNA sequence
GGTCCAATCCCGCCGACGATCGGCCGAGCATGGAGAACTCTAAGGGAGGTACTGTTTCTAGAAAACAGGCTCTCCGGTTGTCTGCCTTTCGAGATTGGGTATCTAATCAA
AGCCACCGTATTCGACGCCAACTCCAACATTCTGACGGGTCCAATACCCCAGTCTTTCGGCTGCTTACGGAGCCTACAAATTCTCAACTTGGCCAACAACCAATTCTACG
GAACCATCCCGGACTCACTCTGCAGCCTCCCGGACGTGTTCAACATAACTCTAAGCAACAAC
Protein sequenceShow/hide protein sequence
GPIPPTIGRAWRTLREVLFLENRLSGCLPFEIGYLIKATVFDANSNILTGPIPQSFGCLRSLQILNLANNQFYGTIPDSLCSLPDVFNITLSNN