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MS018876 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018876
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold89:90554..90759
RNA-Seq ExpressionMS018876
SyntenyMS018876
Gene Ontology termsNA
InterPro domainsIPR017066 - E3 ubiquitin-protein ligase BOI-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3952011.1 hypothetical protein CMV_022396 [Castanea mollissima]5.9e-0753.52Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   SALK NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

XP_023917872.1 probable BOI-related E3 ubiquitin-protein ligase 2 [Quercus suber]5.9e-0753.52Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   SALK NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

XP_028783990.1 probable BOI-related E3 ubiquitin-protein ligase 2 [Prosopis alba]5.9e-0752.11Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EASA Q++A+YN+   +ALKYNLQ  YAQ RD KEG  +SEV+ T +CCNG    FH + K+ ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

XP_028806958.1 probable BOI-related E3 ubiquitin-protein ligase 2 [Prosopis alba]5.9e-0752.11Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EASA Q++A+YN+   +ALKYNLQ  YAQ RD KEG  +SEV+ T +CCNG    FH + K+ ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

XP_030950253.1 probable BOI-related E3 ubiquitin-protein ligase 2 [Quercus lobata]5.9e-0753.52Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   SALK NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

TrEMBL top hitse value%identityAlignment
A0A1R3I8M7 S-ribonuclease binding protein, SBP1, pollen8.4e-0752.11Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   +ALK+NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K   D+ +V
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

A0A2N9EJ32 RING-type domain-containing protein6.4e-0752.11Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   +ALK NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

A0A6A2Y126 Heat stress transcription factor B-4-like3.8e-0753.52Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNL-QSYAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   +ALK+NL Q+YAQSRD KEG  +SEV+ T +CCNG    FH I K  +DV  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNL-QSYAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

A0A6P4AF03 probable BOI-related E3 ubiquitin-protein ligase 38.4e-0750.7Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   +ALK+NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + +  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

A0A7N2KS48 RING-type domain-containing protein2.9e-0753.52Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV
        T EA A QQ+A+YN+   SALK NLQ  YAQSRD KEG  +SEV+ T +CCNG    FH + K  ND+  +
Subjt:  TAEASARQQQAKYNDTTTSALKYNLQS-YAQSRDGKEGHHESEVNKTTNCCNGW---FHHIYKNKNDVNSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45976.1 S-ribonuclease binding protein 11.0e-0449.06Show/hide
Query:  TAEASARQQQAKYNDTTTSALKYNL-QSYAQSRDGKEGHHESEVNKTTNCCNG
        T EA A QQ+AKYN+   +AL YNL ++  + RD  EG  +SEV+ T +C NG
Subjt:  TAEASARQQQAKYNDTTTSALKYNL-QSYAQSRDGKEGHHESEVNKTTNCCNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAGCGGAAGCAAGCGCTCGGCAACAACAAGCTAAATATAATGATACGACAACCTCAGCCCTCAAGTATAATCTTCAGTCCTATGCTCAGAGCAGAGATGGCAAAGAAGG
GCATCATGAAAGTGAGGTAAACAAAACTACTAATTGCTGCAATGGTTGGTTTCATCATATTTACAAGAACAAGAATGACGTGAACTCAGTG
mRNA sequenceShow/hide mRNA sequence
ACAGCGGAAGCAAGCGCTCGGCAACAACAAGCTAAATATAATGATACGACAACCTCAGCCCTCAAGTATAATCTTCAGTCCTATGCTCAGAGCAGAGATGGCAAAGAAGG
GCATCATGAAAGTGAGGTAAACAAAACTACTAATTGCTGCAATGGTTGGTTTCATCATATTTACAAGAACAAGAATGACGTGAACTCAGTG
Protein sequenceShow/hide protein sequence
TAEASARQQQAKYNDTTTSALKYNLQSYAQSRDGKEGHHESEVNKTTNCCNGWFHHIYKNKNDVNSV