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MS018881 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018881
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglutamate receptor 2.5-like
Genome locationscaffold89:138602..138895
RNA-Seq ExpressionMS018881
SyntenyMS018881
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652078.1 hypothetical protein Csa_018677 [Cucumis sativus]5.4e-0954.12Show/hide
Query:  SFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSL-QKTARIGVVFDSGSPIGKQQKVAMKMAF------PCLELEPLHLHDSPAS
        SFC L  FLGLLL+ LG+ Q   ++  FKC+ +L  K+ RIGVVFDSGS IGKQQ VAMKMA        C     L LHDS A+
Subjt:  SFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSL-QKTARIGVVFDSGSPIGKQQKVAMKMAF------PCLELEPLHLHDSPAS

XP_022144191.1 glutamate receptor 2.5-like [Momordica charantia]3.0e-39100Show/hide
Query:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG
        LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG
Subjt:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG

XP_022962262.1 glutamate receptor 2.5-like [Cucurbita moschata]4.2e-0951.4Show/hide
Query:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS
        LRS FCGLS  LGLLL+   LG+ +   ++ +  CQ   K   KT RIGVVFDSGS +GKQQ VAMKM         PCL+LE L LHD      SP SS
Subjt:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS

Query:  SGNLIFK
        + +LI K
Subjt:  SGNLIFK

XP_023546335.1 glutamate receptor 2.5-like [Cucurbita pepo subsp. pepo]3.5e-0850.47Show/hide
Query:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS
        LRS FCGLS  LGLLL+   LG+ +   ++ +  CQ   K   KT RIGVVFDSGS +GKQQ VAMKM          CL+LE L LHD      SP SS
Subjt:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS

Query:  SGNLIFK
        + +LI K
Subjt:  SGNLIFK

XP_038884567.1 glutamate receptor 2.5-like [Benincasa hispida]2.1e-0854.81Show/hide
Query:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSL-QKTARIGVVFDSGSPIGKQQKVAMKMAF------PCLELEPLHLHDSPA----SSSGNLIF
        +LL SF  L  FLGLLL+G  A  TS   EL  CQK+L  KT RIGV FDSGS IGKQQ VAMKMA        C +LE L LHDS A    SSS + + 
Subjt:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSL-QKTARIGVVFDSGSPIGKQQKVAMKMAF------PCLELEPLHLHDSPA----SSSGNLIF

Query:  KLFT
         L T
Subjt:  KLFT

TrEMBL top hitse value%identityAlignment
A0A0A0LKV1 Uncharacterized protein3.2e-0748.94Show/hide
Query:  FCGLSCFLGL--LLVGLGAPQTSNAQELFKCQKSL---QKTARIGVVFDSGSPIGKQQKVAMKMAF--------PCLELEPLHLHDSPASSSGN
        FC  S FLGL  L++ LG+    N +EL  CQ++L     TARIGVVFDSGS IGKQQ VA+KM           C +LE L LHDS  +S+ +
Subjt:  FCGLSCFLGL--LLVGLGAPQTSNAQELFKCQKSL---QKTARIGVVFDSGSPIGKQQKVAMKMAF--------PCLELEPLHLHDSPASSSGN

A0A6J1CSK9 glutamate receptor 2.5-like1.4e-39100Show/hide
Query:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG
        LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG
Subjt:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSG

A0A6J1HC86 glutamate receptor 2.5-like2.0e-0951.4Show/hide
Query:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS
        LRS FCGLS  LGLLL+   LG+ +   ++ +  CQ   K   KT RIGVVFDSGS +GKQQ VAMKM         PCL+LE L LHD      SP SS
Subjt:  LRS-FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASS

Query:  SGNLIFK
        + +LI K
Subjt:  SGNLIFK

A0A6J1HD04 glutamate receptor 2.5-like1.6e-0646.6Show/hide
Query:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASSSGNL
        +L  +FC  SCFLGLLL+ L     ++            KT RIGVVFDSGS IGKQQKVAMKM          C +LE L LHD      SP SS   +
Subjt:  LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASSSGNL

Query:  IFK
        I K
Subjt:  IFK

A0A6J1K353 glutamate receptor 2.5-like2.5e-0748.54Show/hide
Query:  FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASSSGNL
        FC LS  LGLLL+   LG+ +   ++ +  CQ   K   KT RIGVVFDSGS +GKQQ VAMKM          CL+LE L LHD      SP SS+ +L
Subjt:  FCGLSCFLGLLLV--GLGAPQTSNAQELFKCQ---KSLQKTARIGVVFDSGSPIGKQQKVAMKMAF-------PCLELEPLHLHD------SPASSSGNL

Query:  IFK
        I K
Subjt:  IFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTCTCCGTAGCTTCTGCGGCCTCTCCTGCTTTCTTGGACTGCTGCTGGTGGGCTTGGGAGCTCCTCAGACAAGTAATGCTCAGGAGTTGTTTAAGTGTCAAAAAAG
CCTTCAAAAGACTGCAAGAATTGGAGTGGTTTTCGACAGCGGCTCTCCCATTGGGAAGCAACAGAAGGTGGCAATGAAGATGGCTTTCCCATGTCTTGAATTGGAGCCTC
TCCACCTCCATGATTCTCCTGCTTCTTCTTCTGGTAATCTCATCTTCAAGCTTTTTACTTCATTTACATGTTCT
mRNA sequenceShow/hide mRNA sequence
CTTCTTCTCCGTAGCTTCTGCGGCCTCTCCTGCTTTCTTGGACTGCTGCTGGTGGGCTTGGGAGCTCCTCAGACAAGTAATGCTCAGGAGTTGTTTAAGTGTCAAAAAAG
CCTTCAAAAGACTGCAAGAATTGGAGTGGTTTTCGACAGCGGCTCTCCCATTGGGAAGCAACAGAAGGTGGCAATGAAGATGGCTTTCCCATGTCTTGAATTGGAGCCTC
TCCACCTCCATGATTCTCCTGCTTCTTCTTCTGGTAATCTCATCTTCAAGCTTTTTACTTCATTTACATGTTCT
Protein sequenceShow/hide protein sequence
LLLRSFCGLSCFLGLLLVGLGAPQTSNAQELFKCQKSLQKTARIGVVFDSGSPIGKQQKVAMKMAFPCLELEPLHLHDSPASSSGNLIFKLFTSFTCS