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MS018891 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018891
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand
Genome locationscaffold89:224549..224830
RNA-Seq ExpressionMS018891
SyntenyMS018891
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.3e-2870.97Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        MGN K  +K+YKRVLVP+SEEQLA VF+NHD+DGDG LTKE+LKQAF YLGS FS FR  +ALRAAD++GDGVI+M+E+ KLI YAK   YTI
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2969.15Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC
        MGN K  +K+YKRVLVP +EEQLAG+F++HD+DGDGKLTKE+LKQAF+YLGS FS+FRA +ALRAAD+DGDG I M E+ KLI Y K   YT+C
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2971.28Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC
        MGN K  +K+YKRVLVP+SEEQLA VF+NHD DGDGKLTKE+LKQAF YLGS FS+FR  +ALRAAD+DGDG I+M E+ KLI YAK   YT+C
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2763.83Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC
        MGN K +  +YKRVLVP++EEQLA +F++HD+DGDGKL+KE+LKQAF+YLGS FS+FR  +ALRAAD++GDG I+M+E++KLI Y K   YT+C
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-3072.34Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC
        MGN K  +K+YKRVLVP+SEEQLA VF+NHD DGDGKLTKE+LKQAF YLGS FS+FR  +ALRAAD DGDG I+M E+DKLI YAK   YT+C
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein7.8e-1956.63Show/hide
Query:  YKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        YKR  VP+S +QL  +F  HD DGDG+L++ +LK AF  LGSN+S FRA Q+L+AAD+DGDG +T++ELD+L+ YA R  Y I
Subjt:  YKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

A0A0A0LRB6 Uncharacterized protein5.4e-2869.89Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        MGN K  +K+YKRVLVP+SEEQLA VF+NHD+DGDG LTKE+LKQAF YLGS F  FR  +ALRAAD++GDGVI+M+E+ KLI YAK   YTI
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

A0A2N9FYQ0 Uncharacterized protein1.3e-1853.57Show/hide
Query:  SYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        S+KR  +P++EEQL  +F++HD DGDGKL+++++K+AF YLGS + A+RA+QA+  AD+D DG I  EEL KL+ YA    YTI
Subjt:  SYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.1e-2870.97Show/hide
Query:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        MGN K  +K+YKRVLVP+SEEQLA VF+NHD+DGDG LTKE+LKQAF YLGS FS FR  +ALRAAD++GDGVI+M+E+ KLI YAK   YTI
Subjt:  MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

A0A5A7VBH2 Calcium-binding EF-hand1.3e-1856.63Show/hide
Query:  YKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI
        YKR  VP+S +QL  +F  HD DGDG+L++ +LK AF  LGSN+S FRA Q+L+AAD+DGDG +T++ELD L+ YA R  Y I
Subjt:  YKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTI

SwissProt top hitse value%identityAlignment
P05933 Calmodulin1.9e-0640Show/hide
Query:  SEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI
        +EE++   F+  DKDG+G +T E+L      LG   S       +R AD+DGDGVI  EE  ++I
Subjt:  SEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI

Q2QY37 Calcium-dependent protein kinase 261.9e-0639.02Show/hide
Query:  SEEQLAG---VFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEE-LDKLIHYAK----RHNYT
        SEE++ G   +F+N DKD  G +T E+LK      G+ FS     Q + AAD+DG+G+I  EE +   +H  K     H YT
Subjt:  SEEQLAG---VFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEE-LDKLIHYAK----RHNYT

Q2RAV0 Calcium-dependent protein kinase 251.9e-0639.02Show/hide
Query:  SEEQLAG---VFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEE-LDKLIHYAK----RHNYT
        SEE++ G   +F+N DKD  G +T E+LK      G+ FS     Q + AAD+DG+G+I  EE +   +H  K     H YT
Subjt:  SEEQLAG---VFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEE-LDKLIHYAK----RHNYT

Q9LQN4 Probable calcium-binding protein CML171.9e-0640Show/hide
Query:  PYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYA
        PY+EEQL  +FR  D DG+G +T  +L  +   LG   +       ++ ADSDGDG I  +E  K I+ A
Subjt:  PYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYA

Q9M8U1 Probable calcium-binding protein CML183.3e-0635.06Show/hide
Query:  VLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHN
        V  PY+++QL  +FR  D+DG+G +T  +L  +   LG   +A      ++ AD DGDG I  +E  + I  A   N
Subjt:  VLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHN

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein1.4e-0740Show/hide
Query:  PYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYA
        PY+EEQL  +FR  D DG+G +T  +L  +   LG   +       ++ ADSDGDG I  +E  K I+ A
Subjt:  PYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYA

AT1G76650.1 calmodulin-like 381.5e-0638.71Show/hide
Query:  QLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI
        +L  VF   D + DG+++ E+L+++F  LG   S   A  A+R +D+DGDG++  EE  +LI
Subjt:  QLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI

AT1G76650.3 calmodulin-like 381.5e-0638.71Show/hide
Query:  QLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI
        +L  VF   D + DG+++ E+L+++F  LG   S   A  A+R +D+DGDG++  EE  +LI
Subjt:  QLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI

AT3G03000.1 EF hand calcium-binding protein family2.3e-0735.06Show/hide
Query:  VLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHN
        V  PY+++QL  +FR  D+DG+G +T  +L  +   LG   +A      ++ AD DGDG I  +E  + I  A   N
Subjt:  VLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHN

AT3G51920.1 calmodulin 93.4e-0633.85Show/hide
Query:  SEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI
        + ++L  VFR  D+DGDG +++ +L +    +G   +A  A   +R AD DGDG ++  E  K++
Subjt:  SEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTTGAAGGGCAGTACAAAAAGTTATAAACGAGTTCTGGTTCCCTACTCGGAGGAGCAACTCGCCGGCGTTTTCAGGAACCACGACAAGGACGGAGATGGGAA
GCTCACCAAGGAGGATCTGAAGCAAGCCTTCCACTATCTAGGTTCCAATTTCAGTGCCTTCCGAGCCCACCAAGCCCTACGCGCCGCCGACAGCGACGGCGACGGCGTCA
TCACCATGGAGGAGCTTGATAAGCTTATTCACTATGCCAAACGTCATAATTACACTATTTGC
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTTGAAGGGCAGTACAAAAAGTTATAAACGAGTTCTGGTTCCCTACTCGGAGGAGCAACTCGCCGGCGTTTTCAGGAACCACGACAAGGACGGAGATGGGAA
GCTCACCAAGGAGGATCTGAAGCAAGCCTTCCACTATCTAGGTTCCAATTTCAGTGCCTTCCGAGCCCACCAAGCCCTACGCGCCGCCGACAGCGACGGCGACGGCGTCA
TCACCATGGAGGAGCTTGATAAGCTTATTCACTATGCCAAACGTCATAATTACACTATTTGC
Protein sequenceShow/hide protein sequence
MGNLKGSTKSYKRVLVPYSEEQLAGVFRNHDKDGDGKLTKEDLKQAFHYLGSNFSAFRAHQALRAADSDGDGVITMEELDKLIHYAKRHNYTIC