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MS018892 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018892
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold89:236866..237034
RNA-Seq ExpressionMS018892
SyntenyMS018892
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.5e-0655.36Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL
        LTKEE K AF YLGSR+S FR      A  T GDG+I+++EMGKLI Y K   Y++
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL

KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]9.3e-0651.79Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL
        L+KEE K AFSYLGSR+SAFRA     +     DG+++++EM KLI Y KG  Y++
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0657.14Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL
        LTKEE K AF+YLGSR+S+FRA     +A   GDG IN+ EM KLI Y K   Y+L
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0657.14Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL
        LTKEE K AF YLGSR+S+FR      A  T GDG I++ EMGKLI Y K   Y+L
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-0655.36Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL
        L+KEE K AF+YLGSR+S+FR      A  T GDG I+++EM KLI Y KG  Y+L
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein5.0e-0555.77Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPTG-DGIINLEEMGKLIVYGKGC
        LTKEE   AF+YLGSR++A R      A     DG+I+L+EM KLIVY KGC
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPTG-DGIINLEEMGKLIVYGKGC

A0A0A0LRB6 Uncharacterized protein4.5e-0653.57Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL
        LTKEE K AF YLGSR+  FR      A  T GDG+I+++EMGKLI Y K   Y++
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL

A0A2P6Q0F9 Putative EF-hand domain pair protein1.1e-0453.57Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL
        L KEE KAAF  LGSR+S++RA R    A   GDGII+ EE+  LI Y   C Y L
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL

A0A498JAE0 Uncharacterized protein1.5e-0450Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL
        L+KEE KA+F  LGSR+S+FRA R    A    DG I++EE+G+L+ Y   C Y L
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRG-PSAPPTGDGIINLEEMGKLIVYGKGCNYSL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.2e-0655.36Show/hide
Query:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL
        LTKEE K AF YLGSR+S FR      A  T GDG+I+++EMGKLI Y K   Y++
Subjt:  LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPT-GDGIINLEEMGKLIVYGKGCNYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCACCAAAGAAGAGTTCAAGGCAGCCTTCAGTTATCTGGGTTCGAGGTACAGCGCCTTCCGAGCCCACCGAGGCCCCTCCGCACCACCGACGGGCGACGGGATCATAAA
TTTGGAGGAGATGGGTAAGTTGATTGTGTATGGTAAAGGTTGTAACTATAGTCTTGGT
mRNA sequenceShow/hide mRNA sequence
CTCACCAAAGAAGAGTTCAAGGCAGCCTTCAGTTATCTGGGTTCGAGGTACAGCGCCTTCCGAGCCCACCGAGGCCCCTCCGCACCACCGACGGGCGACGGGATCATAAA
TTTGGAGGAGATGGGTAAGTTGATTGTGTATGGTAAAGGTTGTAACTATAGTCTTGGT
Protein sequenceShow/hide protein sequence
LTKEEFKAAFSYLGSRYSAFRAHRGPSAPPTGDGIINLEEMGKLIVYGKGCNYSLG