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MS018893 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018893
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalmodulin
Genome locationscaffold89:239595..239873
RNA-Seq ExpressionMS018893
SyntenyMS018893
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.1e-1857.78Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V  SE+QL  +F+ +DRD DGNL +EEL +AF ++G++  + FRV+EALRAAD NGDGVIS  EM KLI YAK+R Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1653.33Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V L+E+QL  IF+ +DRD DG L +EEL +AF+++G++  ++FR DEALRAAD +GDG I+  EM+KLI Y K+R Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1654.44Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V  SE+QL  +F+ +D D DG L +EEL +AF ++G++  ++FRV+EALRAAD +GDG IS  EM KLI YAKSR Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-1756.67Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN  S N+KR  V  +E+QL  IF+ +DRD DG L +EEL +AF+++G++  ++FRV EALRAAD NGDG IS  EMNKLI Y K R Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-1755.56Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V  SE+QL  +F+ +D D DG L +EEL +AF ++G++  ++FRV+EALRAADI+GDG IS  EM+KLI YAKSR Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein3.5e-1156.94Show/hide
Query:  SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAK
        SLSE+QL  IF+K+D D+D  L +EELT+AF+++G++  A  RV EA+RA D N DGVIS  EM+KLI Y K
Subjt:  SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAK

A0A0A0LRB6 Uncharacterized protein5.0e-1856.67Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V  SE+QL  +F+ +DRD DG+L +EEL +AF ++G++    FRV+EALRAAD NGDGVIS  EM KLI YAK+R Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

A0A1R3HWY3 Calcium-binding EF-hand6.6e-1046.43Show/hide
Query:  FNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        F  K A + L+E+QL++IF+ +D +KDG L +EEL+ AF  MG  H    +V+ A++ ADIN DGVI  +E++KL  YA S+ Y
Subjt:  FNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

A0A5A7V219 Putative calcium-binding protein CML107.8e-1156.94Show/hide
Query:  SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAK
        SLSE+QL  IF+K+D D+D  L +EEL +AF ++G++  A  RV  ALRA D NGDGVIS  EM+KLI Y K
Subjt:  SLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAK

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.0e-1857.78Show/hide
Query:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY
        MGN+ S  +KR  V  SE+QL  +F+ +DRD DGNL +EEL +AF ++G++  + FRV+EALRAAD NGDGVIS  EM KLI YAK+R Y
Subjt:  MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNY

SwissProt top hitse value%identityAlignment
P04464 Calmodulin3.6e-0539.39Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        SE++L+E FR +D+D+DG +   EL    + +G K      VDE +R AD++GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

P24044 Calmodulin3.6e-0540.91Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        +E++L E FR +DRD DG +  +EL    + +G K      VDE +R ADI+GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

P62203 Calmodulin3.6e-0540.91Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        +E++L E FR +DRD DG +  +EL    + +G K      VDE +R ADI+GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

Q39752 Calmodulin2.8e-0539.39Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        SE++L+E FR +D+D++G +   EL    + +G   K T  VDE +R AD++GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

Q9LI84 Probable calcium-binding protein CML166.5e-0741.67Show/hide
Query:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA
        EV ++++QL E+FR +DRD +G++   EL  + + MG  H  T+R + E +  AD NGDGVIS  E + ++A
Subjt:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family5.7e-0640.28Show/hide
Query:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA
        EV ++ +QL EIF+ +DRD +G +   EL  A + MG     T++ + E ++ AD NGDGVIS  E   ++A
Subjt:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA

AT1G66410.1 calmodulin 41.7e-0534.25Show/hide
Query:  KRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        K+ + + SE++L+E FR +D+D++G +   EL    + +G K      V+E +R AD++GDG I+ +E  K++
Subjt:  KRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

AT3G25600.1 Calcium-binding EF-hand family protein4.7e-0841.67Show/hide
Query:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA
        EV ++++QL E+FR +DRD +G++   EL  + + MG  H  T+R + E +  AD NGDGVIS  E + ++A
Subjt:  EVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFR-VDEALRAADINGDGVISSQEMNKLIA

AT3G43810.1 calmodulin 79.7e-0637.88Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        SE++L+E FR +D+D++G +   EL    + +G K      VDE +R AD++GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI

AT5G21274.1 calmodulin 67.4e-0637.88Show/hide
Query:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI
        SE++L+E FR +D+D++G +   EL    + +G K  +   VDE +R AD++GDG I+ +E  K++
Subjt:  SEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACAACAGTAGTTTTAATCATAAGCGTGCTGAGGTTTCCTTATCTGAAAAGCAGCTGGAGGAAATTTTCAGGAAATATGATAGGGATAAAGATGGCAACCTCAT
CAGAGAAGAGTTGACGAAAGCCTTCAGTTTTATGGGTAACAAGCACAAGGCCACCTTCCGAGTCGACGAGGCCCTCCGTGCCGCCGACATCAACGGCGACGGCGTCATAA
GTTCGCAGGAGATGAATAAGCTCATTGCCTATGCTAAAAGTCGTAACTATATAAACCCT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACAACAGTAGTTTTAATCATAAGCGTGCTGAGGTTTCCTTATCTGAAAAGCAGCTGGAGGAAATTTTCAGGAAATATGATAGGGATAAAGATGGCAACCTCAT
CAGAGAAGAGTTGACGAAAGCCTTCAGTTTTATGGGTAACAAGCACAAGGCCACCTTCCGAGTCGACGAGGCCCTCCGTGCCGCCGACATCAACGGCGACGGCGTCATAA
GTTCGCAGGAGATGAATAAGCTCATTGCCTATGCTAAAAGTCGTAACTATATAAACCCT
Protein sequenceShow/hide protein sequence
MGNNSSFNHKRAEVSLSEKQLEEIFRKYDRDKDGNLIREELTKAFSFMGNKHKATFRVDEALRAADINGDGVISSQEMNKLIAYAKSRNYINP