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MS018895 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018895
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like
Genome locationscaffold89:253581..253835
RNA-Seq ExpressionMS018895
SyntenyMS018895
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.2e-2667.06Show/hide
Query:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        M+ + ++LQLSRE++KEIFREHDIDGDG LS+SE+ +AF F G++LPFYKAHYG+A+AD +GDG+I E+ELD+LVDYA KFQ+K+
Subjt:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]3.2e-2668.24Show/hide
Query:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        M+ + TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD +GDGFI E+ELD+LVDYA KFQ+K+
Subjt:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]3.0e-2467.5Show/hide
Query:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        ++   SREEMKEIFREHDIDGDG LSISEL +A  FLG+ +PFYKAHYG+AY D +GDG I+EDELD+L+DYA +FQ ++
Subjt:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.5e-2669.05Show/hide
Query:  ALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        A+  TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD +GDGFI E+ELD+LVDYA KFQ+K+
Subjt:  ALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

XP_023002888.1 calmodulin-like [Cucurbita maxima]6.8e-2469.23Show/hide
Query:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+E+EL++LVDYA +   KK
Subjt:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein1.5e-2467.5Show/hide
Query:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        ++   SREEMKEIFREHDIDGDG LSISEL +A  FLG+ +PFYKAHYG+AY D +GDG I+EDELD+L+DYA +FQ ++
Subjt:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

A0A0A0LRC1 Uncharacterized protein1.6e-2668.24Show/hide
Query:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        M+ + TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD +GDGFI E+ELD+LVDYA KFQ+K+
Subjt:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

A0A5A7UYC0 Putative calcium-binding protein CML101.6e-2667.06Show/hide
Query:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        M+ + ++LQLSRE++KEIFREHDIDGDG LS+SE+ +AF F G++LPFYKAHYG+A+AD +GDG+I E+ELD+LVDYA KFQ+K+
Subjt:  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

A0A6J1GK16 calmodulin-like3.3e-2469.23Show/hide
Query:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+E+EL++LVDYA +   KK
Subjt:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

A0A6J1KUW2 calmodulin-like3.3e-2469.23Show/hide
Query:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+E+EL++LVDYA +   KK
Subjt:  LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

SwissProt top hitse value%identityAlignment
P05933 Calmodulin5.6e-0535.38Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        + EE++E F+  D DG+G +++ ELT   + LG  L   +    +  AD DGDG I  +E  R++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

P62184 Calmodulin2.1e-0436.92Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        S EE++E FR  D DGDG +S +EL    + LG  L   +    +  AD DGDG +  +E  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

Q8RZB5 Probable calcium-binding protein CML102.3e-0646.77Show/hide
Query:  EEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRL
        EEM+ +FR+ D +GDG +S SEL   F  LG+     +    +A ADADGDGFI+ DE   L
Subjt:  EEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRL

Q8X187 Calmodulin1.6e-0438.46Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        S EE+KE F+  D DG+G +S +EL    + LG  L   +    +  AD DGDG I  DE  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

Q9S744 Calmodulin-like protein 99.6e-0532.86Show/hide
Query:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        T  + + +E+ E+FR  D DGDG++S  EL +    +G  +   +A + +  AD DGDGF++  E  +++
Subjt:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 47.5e-0536.92Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

AT1G66410.2 calmodulin 47.5e-0536.92Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

AT3G51920.1 calmodulin 96.8e-0632.86Show/hide
Query:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        T  + + +E+ E+FR  D DGDG++S  EL +    +G  +   +A + +  AD DGDGF++  E  +++
Subjt:  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV

AT5G17470.1 EF hand calcium-binding protein family2.6e-0538.03Show/hide
Query:  MKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK
        MKE F  +DIDGDG +S SE+      LG      +    +   DADGDGF++ +E   +    M   NKK
Subjt:  MKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK

AT5G37780.1 calmodulin 17.5e-0536.92Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV
        S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCA
AGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGC
TCGTCGATTACGCCATGAAATTTCAGAATAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCA
AGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGC
TCGTCGATTACGCCATGAAATTTCAGAATAAGAAG
Protein sequenceShow/hide protein sequence
MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK