CuGenDBv2

Gene ID	MS018896
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	calmodulin-like
Genome location	scaffold89:256446..256700
RNA-Seq Expression	MS018896
Synteny	MS018896
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]

1.5e-23

64.71

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Query:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        M+   ++LQLSRE IKEIF EHD+DGDG LSLSE+ +AF F G++LP+YKAHYG+A+AD +GDG I E+ELD LVDYA KF  K+
Subjt:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]

1.3e-22

62.35

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Query:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        M+    RLQLSRE IKEIF EHD+DGDG LS++E+ +AF   G++LP+YKAHYG+A+AD +GDG I E+ELD LVDYA KF  K+
Subjt:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]

5.7e-23

68.35

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Query:  RLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        +++ SR QIKEIF+EHD+DGDG LS+SEL +AFSFLG+++P YKAHYGLA+AD DGDGLI+E+ELD LVDYA K   +K
Subjt:  RLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

XP_022951879.1 calmodulin-like [Cucurbita moschata]

8.0e-25

71.25

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Query:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        A ++LSR QIKEIF+EHD+DGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDGLI+E+EL+ LVDYA + + KK
Subjt:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

XP_023002888.1 calmodulin-like [Cucurbita maxima]

8.0e-25

71.25

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Query:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        A ++LSR QIKEIF+EHD+DGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDGLI+E+EL+ LVDYA + + KK
Subjt:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRC1 Uncharacterized protein

6.2e-23

62.35

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Query:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        M+    RLQLSRE IKEIF EHD+DGDG LS++E+ +AF   G++LP+YKAHYG+A+AD +GDG I E+ELD LVDYA KF  K+
Subjt:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

A0A5A7UYC0 Putative calcium-binding protein CML10

7.3e-24

64.71

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Query:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        M+   ++LQLSRE IKEIF EHD+DGDG LSLSE+ +AF F G++LP+YKAHYG+A+AD +GDG I E+ELD LVDYA KF  K+
Subjt:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

A0A6J1CSH1 probable calcium-binding protein CML15

2.8e-23

68.35

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Query:  RLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        +++ SR QIKEIF+EHD+DGDG LS+SEL +AFSFLG+++P YKAHYGLA+AD DGDGLI+E+ELD LVDYA K   +K
Subjt:  RLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

A0A6J1GK16 calmodulin-like

3.9e-25

71.25

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Query:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        A ++LSR QIKEIF+EHD+DGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDGLI+E+EL+ LVDYA + + KK
Subjt:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

A0A6J1KUW2 calmodulin-like

3.9e-25

71.25

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Query:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK
        A ++LSR QIKEIF+EHD+DGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDGLI+E+EL+ LVDYA + + KK
Subjt:  ARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

SwissProt top hits

e value

%identity

Alignment

P05933 Calmodulin

8.1e-04

32.31

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Query:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLV
        + E+++E F   D DG+G +++ ELT   + LG  L   +    +  AD DGDG+I  +E   ++
Subjt:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLV

Q5ZD81 Probable calcium-binding protein CML12

8.1e-04

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Query:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE
        + P +  + + + ++ E F   D DG+G +S +EL ++ + +G+ + Y +    +  AD DGDGLI+ +E
Subjt:  MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE

Q8RZB5 Probable calcium-binding protein CML10

2.8e-04

41.38

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Query:  EQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE
        E+++ +F + D +GDG +S SEL   F  LG+     +    +A ADADGDG I+ DE
Subjt:  EQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE

Q8X187 Calmodulin

6.2e-04

41.67

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Query:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE
        S E+IKE F   D DG+G +S +EL    + LG  L   +    +  AD DGDG I  DE
Subjt:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE

Arabidopsis top hits

e value

%identity

Alignment

AT1G18530.1 EF hand calcium-binding protein family

6.4e-04

37.93

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Query:  QIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDEL
        Q+K+IF   D+D DG+L++ EL      LG      + H  LA  D++G+G +  DEL
Subjt:  QIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDEL

AT3G50770.1 calmodulin-like 41

1.7e-04

33.93

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Query:  QLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDG
        Q S+E+++++F   D DGDG +S  EL   F  +G  + +  A   +   D D DG
Subjt:  QLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDG

AT4G14640.1 calmodulin 8

8.3e-04

36.67

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Query:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE
        + E++KE F   D D +G +S SEL+     LG  L   +    +  AD DGDG +  DE
Subjt:  SREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDE

Sequences

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CDS sequence

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ATGGCACCCTTCAAAGCTCGGTTGCAGTTGTCGAGGGAACAGATAAAGGAGATCTTTCTCGAGCACGACCTCGACGGAGATGGCGCCCTCAGCCTCAGTGAGCTCACTCA
AGCCTTCAGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCATTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCCTCATCACTGAAGACGAGCTCGATGACC
TTGTCGACTATGCCATGAAATTTCATGCCAAGAAG

mRNA sequence

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Protein sequence

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MAPFKARLQLSREQIKEIFLEHDLDGDGALSLSELTQAFSFLGNLLPYYKAHYGLAYADADGDGLITEDELDDLVDYAMKFHAKK

MS018896 (gene) of Bitter gourd (TR) v1 genome