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MS018897 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018897
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationscaffold89:261421..261690
RNA-Seq ExpressionMS018897
SyntenyMS018897
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.9e-2467.86Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        KKK   KL +EE+K IFR HD NGDG LSIKELSRAFGS GA  PLYRA  G+  AD DGDG I+++ELEKVVDYA+KCKY+++
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2471.43Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        KK  S  L REE+KAIF+ HD NGDG LSI+ELSRAFG LGA LPLYRA  GIL AD +GDG IT+ EL+KVVDYA+KCKY+II
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2469.05Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        KKK + +L REE+KAIFR HD+NGDG LSI+ELSRAFG  GA LPLYRA   +  ADA+GDG IT++EL+KVVDYA+KCKY+II
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]2.7e-2362.64Show/hide
Query:  MTHQCV-KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        MT Q   KKK   KL +EE+K +FR HD NGDG LSIKELSRAFG  GA  PLYRA  G+  AD DGDG I+++EL+KVVDYA+KCKY+++
Subjt:  MTHQCV-KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]1.3e-4197.78Show/hide
Query:  MTHQCVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        MTH+CVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRA CGILAADADGDGLITDEELEKVVDYAVKCKYDII
Subjt:  MTHQCVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein1.3e-2362.64Show/hide
Query:  MTHQCV-KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        MT Q   KKK   KL +EE+K +FR HD NGDG LSIKELSRAFG  GA  PLYRA  G+  AD DGDG I+++EL+KVVDYA+KCKY+++
Subjt:  MTHQCV-KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

A0A5A7UY46 Putative calcium-binding protein CML109.1e-2567.86Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        KKK   KL +EE+K IFR HD NGDG LSIKELSRAFGS GA  PLYRA  G+  AD DGDG I+++ELEKVVDYA+KCKY+++
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

A0A6J1CS20 calmodulin-like protein 56.3e-4297.78Show/hide
Query:  MTHQCVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII
        MTH+CVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRA CGILAADADGDGLITDEELEKVVDYAVKCKYDII
Subjt:  MTHQCVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII

A0A6J1GK16 calmodulin-like3.1e-1757.89Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA
        +K  S+KL R ++K IF  HDI+GDG+LS+ EL++AF   G+++PLY+A  G+  ADADGDGLI++EELEK+VDYA
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA

A0A6J1KUW2 calmodulin-like3.1e-1757.89Show/hide
Query:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA
        +K  S+KL R ++K IF  HDI+GDG+LS+ EL++AF   G+++PLY+A  G+  ADADGDGLI++EELEK+VDYA
Subjt:  KKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA

SwissProt top hitse value%identityAlignment
P05933 Calmodulin2.7e-0538.1Show/hide
Query:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV
        EEV+  F+  D +G+G+++++EL+    SLG  L        I  AD DGDG+I  EE  +V+
Subjt:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV

Q5ZD81 Probable calcium-binding protein CML122.9e-0433.8Show/hide
Query:  KPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV
        +PS+ + + E+   FRA D +G+G +S  EL+R+   +G  +        +  AD DGDGLI+ EE   ++
Subjt:  KPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV

Q9D0E5 EF-hand calcium-binding domain-containing protein 111.7e-0430.26Show/hide
Query:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDY
        VK+K   +L R E++ IF A D++  G L++++  RAF  +   LP          AD D DG ++  + E  +++
Subjt:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDY

Q9FYK2 Probable calcium-binding protein CML252.3e-0439.13Show/hide
Query:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE
        ++K  S K    E++A+F+  D+NGDG +S KEL     SLG  +P       I   D  GDG I  EE
Subjt:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE

Q9NZT1 Calmodulin-like protein 57.0e-0639.68Show/hide
Query:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV
        E+++  FRA D +GDGH+++ EL RA   LG  LP       I  AD D DG +  EE  +++
Subjt:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family5.2e-0438.6Show/hide
Query:  EVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE
        E+K +F+  D NGDG ++ KELS    SLG  +P       I   D +GDG +  +E
Subjt:  EVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE

AT1G24620.1 EF hand calcium-binding protein family1.6e-0539.13Show/hide
Query:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE
        ++K  S K    E++A+F+  D+NGDG +S KEL     SLG  +P       I   D  GDG I  EE
Subjt:  VKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEE

AT2G15680.1 Calcium-binding EF-hand family protein1.4e-0435.48Show/hide
Query:  EVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV
        +++  F   D+NGDG +S +E+      LG    L      + A DADGDGL+  EE  K++
Subjt:  EVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV

AT3G03000.1 EF hand calcium-binding protein family7.9e-0534.85Show/hide
Query:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA
        +++KAIFR  D +G+G+++  EL+ +   LG  L        I  AD DGDG I  +E  + +  A
Subjt:  EEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYA

AT5G17470.1 EF hand calcium-binding protein family2.3e-0432.79Show/hide
Query:  VKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV
        +K  F  +DI+GDG +S  E+      LG    +      + A DADGDG ++ EE + ++
Subjt:  VKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATCAATGTGTCAAGAAGAAGCCAAGCATCAAGTTGCTAAGAGAGGAGGTGAAAGCAATCTTCAGGGCTCACGATATCAACGGCGATGGCCACCTGAGCATCAA
AGAATTGTCGAGAGCATTCGGGTCGCTCGGTGCGCTTCTCCCTCTCTACCGTGCCTTCTGTGGCATCCTCGCCGCTGATGCTGATGGAGATGGACTTATCACCGACGAAG
AACTGGAGAAGGTGGTGGACTATGCTGTGAAATGTAAATATGACATAATC
mRNA sequenceShow/hide mRNA sequence
ATGACTCATCAATGTGTCAAGAAGAAGCCAAGCATCAAGTTGCTAAGAGAGGAGGTGAAAGCAATCTTCAGGGCTCACGATATCAACGGCGATGGCCACCTGAGCATCAA
AGAATTGTCGAGAGCATTCGGGTCGCTCGGTGCGCTTCTCCCTCTCTACCGTGCCTTCTGTGGCATCCTCGCCGCTGATGCTGATGGAGATGGACTTATCACCGACGAAG
AACTGGAGAAGGTGGTGGACTATGCTGTGAAATGTAAATATGACATAATC
Protein sequenceShow/hide protein sequence
MTHQCVKKKPSIKLLREEVKAIFRAHDINGDGHLSIKELSRAFGSLGALLPLYRAFCGILAADADGDGLITDEELEKVVDYAVKCKYDII