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MS018898 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018898
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like
Genome locationscaffold89:267143..267385
RNA-Seq ExpressionMS018898
SyntenyMS018898
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.4e-2370.67Show/hide
Query:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK
        S+ +FSREEMKEIFREHD+DGDG LSI EL+KA GFLG+ +PFYKAHYG+A++D + DG I EDELDKL++YAE+
Subjt:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]7.4e-2875.31Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        AS+L  SRE++KEIFREHD+DGDGRLS+SE+VKAFGF G+ILPFYKAHYG+AHAD + DG+I E+ELDKLV+YAEKFQ K+
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]1.8e-2672.84Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        A+RL  SRE++KEIFREHD+DGDGRLS++E+VKAFG  G+ILPFYKAHYG+AHAD + DGFI E+ELDKLV+YA+KFQ K+
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]2.0e-2570Show/hide
Query:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        S+ +FSREEMKEIFREHD+DGDG LSISEL+KA GFLG+ +PFYKAHYG+A+ D + DG I EDELDKL++YAE+FQ ++
Subjt:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]4.0e-2671.6Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        ++RL  SRE++KEIFREHD+DGDGRLS++E+VKAFG  G+ILPFYKAHYG+AHAD + DGFI E+ELDKLV+YA+KFQ K+
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein9.7e-2670Show/hide
Query:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        S+ +FSREEMKEIFREHD+DGDG LSISEL+KA GFLG+ +PFYKAHYG+A+ D + DG I EDELDKL++YAE+FQ ++
Subjt:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

A0A0A0LRC1 Uncharacterized protein8.8e-2772.84Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        A+RL  SRE++KEIFREHD+DGDGRLS++E+VKAFG  G+ILPFYKAHYG+AHAD + DGFI E+ELDKLV+YA+KFQ K+
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

A0A5A7UYC0 Putative calcium-binding protein CML103.6e-2875.31Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ
        AS+L  SRE++KEIFREHD+DGDGRLS+SE+VKAFGF G+ILPFYKAHYG+AHAD + DG+I E+ELDKLV+YAEKFQ K+
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ

A0A5A7V2Z9 Putative calcium-binding protein CML107.0e-2470.67Show/hide
Query:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK
        S+ +FSREEMKEIFREHD+DGDG LSI EL+KA GFLG+ +PFYKAHYG+A++D + DG I EDELDKL++YAE+
Subjt:  SRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK

A0A6J1CSH1 probable calcium-binding protein CML151.3e-2268.42Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK
        A ++ FSR ++KEIF EHD+DGDG LS+SEL+KAF FLG+++P YKAHYGLA AD D DG I E+ELDKLV+YAEK
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEK

SwissProt top hitse value%identityAlignment
Q8L3R2 Probable calcium-binding protein CML415.9e-0437.04Show/hide
Query:  SREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDG
        S+EE++++F   D DGDG++S  EL   FG +G  +    A   +   D D DG
Subjt:  SREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDG

Q8RZB5 Probable calcium-binding protein CML103.7e-0646.77Show/hide
Query:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL
        EEM+ +FR+ D +GDGR+S SEL   F  LG+     +    +A ADAD DGFI  DE   L
Subjt:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL

Q9LE22 Probable calcium-binding protein CML277.7e-0435.48Show/hide
Query:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL
        EE+K++F + D +GDG++S+ EL   F  +G      + +  L   D D DG+I  DE   L
Subjt:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL

Q9NZT1 Calmodulin-like protein 53.5e-0430.99Show/hide
Query:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLV
        A +     E+++  FR  D DGDG +++ EL +A   LG  LP  +    +  AD D+DG +  +E  +++
Subjt:  ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLV

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein5.5e-0535.48Show/hide
Query:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL
        EE+K++F + D +GDG++S+ EL   F  +G      + +  L   D D DG+I  DE   L
Subjt:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL

AT1G18210.2 Calcium-binding EF-hand family protein5.5e-0535.48Show/hide
Query:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL
        EE+K++F + D +GDG++S+ EL   F  +G      + +  L   D D DG+I  DE   L
Subjt:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKL

AT1G73630.1 EF hand calcium-binding protein family1.6e-0436.84Show/hide
Query:  EMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDE
        E+K++F + D +GDG++S+SEL   F  +G      + +  L   D D DGFI ++E
Subjt:  EMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDE

AT2G41410.1 Calcium-binding EF-hand family protein1.2e-0431.25Show/hide
Query:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGN-ILPFYKAHYGLAHADADEDGFICEDELDKLV
        EE++E+F   D+D +G++S  EL + FG +G+      +    +A  D + DGF+C D+  +++
Subjt:  EEMKEIFREHDLDGDGRLSISELVKAFGFLGN-ILPFYKAHYGLAHADADEDGFICEDELDKLV

AT3G50770.1 calmodulin-like 414.2e-0537.04Show/hide
Query:  SREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDG
        S+EE++++F   D DGDG++S  EL   FG +G  +    A   +   D D DG
Subjt:  SREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAGCAGGCTACACTTCTCCAGGGAGGAGATGAAGGAGATTTTCAGAGAGCACGACCTCGACGGAGATGGTCGATTGAGCATCAGCGAGCTCGTAAAGGCTTTCGGGTT
CCTCGGTAACATCCTCCCTTTCTACAAAGCTCATTACGGTTTGGCTCATGCTGATGCTGATGAAGATGGCTTCATTTGTGAGGACGAGCTCGATAAGCTCGTCAACTACG
CGGAGAAGTTTCAGCCCAAGCAG
mRNA sequenceShow/hide mRNA sequence
GCAAGCAGGCTACACTTCTCCAGGGAGGAGATGAAGGAGATTTTCAGAGAGCACGACCTCGACGGAGATGGTCGATTGAGCATCAGCGAGCTCGTAAAGGCTTTCGGGTT
CCTCGGTAACATCCTCCCTTTCTACAAAGCTCATTACGGTTTGGCTCATGCTGATGCTGATGAAGATGGCTTCATTTGTGAGGACGAGCTCGATAAGCTCGTCAACTACG
CGGAGAAGTTTCAGCCCAAGCAG
Protein sequenceShow/hide protein sequence
ASRLHFSREEMKEIFREHDLDGDGRLSISELVKAFGFLGNILPFYKAHYGLAHADADEDGFICEDELDKLVNYAEKFQPKQ