CuGenDBv2

Gene ID	MS018899
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	calmodulin-like
Genome location	scaffold89:270727..271011
RNA-Seq Expression	MS018899
Synteny	MS018899
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]

4.4e-40

93.68

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV AR ANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK  + K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

XP_022951879.1 calmodulin-like [Cucurbita moschata]

3.2e-30

78.95

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV A+AA EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+    K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

XP_022951880.1 calmodulin-like [Cucurbita moschata]

2.6e-24

69.05

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Query:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+GS++PLYKAHYGL +AD DGDG ISEEEL+KLVDYAE+V   K
Subjt:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

XP_023002888.1 calmodulin-like [Cucurbita maxima]

3.2e-30

78.95

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV A+AA EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+    K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]

5.8e-24

69.05

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Query:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+GS++PLYKAHYGL +AD DGDG ISEEEL KLVDYAE+V   K
Subjt:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CSH1 probable calcium-binding protein CML15

2.1e-40

93.68

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV AR ANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK  + K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

A0A6J1GK16 calmodulin-like

1.5e-30

78.95

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV A+AA EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+    K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

A0A6J1GK54 calmodulin-like

1.3e-24

69.05

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Query:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+GS++PLYKAHYGL +AD DGDG ISEEEL+KLVDYAE+V   K
Subjt:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

A0A6J1KRR4 calmodulin-A-like

2.8e-24

69.05

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Query:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+GS++PLYKAHYGL +AD DGDG ISEEEL KLVDYAE+V   K
Subjt:  EKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

A0A6J1KUW2 calmodulin-like

1.5e-30

78.95

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Query:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        KAQKV A+AA EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+    K
Subjt:  KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

SwissProt top hits

e value

%identity

Alignment

Q8RYJ9 Putative calcium-binding protein CML23

5.3e-04

38.81

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Query:  QIKEIFMEHDIDGDGCLSVSEL-IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAE
        + + +F   D DGDG +S +EL +   + LG  +P  +    +A AD DGDGL+ EEE  +LV   E
Subjt:  QIKEIFMEHDIDGDGCLSVSEL-IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAE

Arabidopsis top hits

e value

%identity

Alignment

AT5G17470.1 EF hand calcium-binding protein family

1.4e-04

36.62

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Query:  IKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK
        +KE F  +DIDGDG +S SE+      LG    + +    +   D DGDG +S EE   ++      CNNK
Subjt:  IKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

Sequences

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CDS sequence

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AAAGCTCAAAAAGTCGGCGCTAGAGCGGCGAATGAAAAGAAGGCACCGAAGATAAAGTTCAGTCGGAGCCAAATCAAGGAGATTTTCATGGAGCACGATATCGATGGTGA
TGGTTGCCTTAGTGTAAGTGAGCTGATAAAGGCTTTTAGTTTTCTAGGTTCAGTCATTCCACTTTACAAAGCTCACTACGGTCTAGCTTTTGCTGATGATGATGGAGATG
GCCTTATCAGCGAGGAAGAACTTGACAAACTCGTTGATTACGCCGAGAAAGTATGTAATAATAAA

mRNA sequence

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Protein sequence

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KAQKVGARAANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKVCNNK

MS018899 (gene) of Bitter gourd (TR) v1 genome