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MS018900 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018900
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like
Genome locationscaffold89:276153..276404
RNA-Seq ExpressionMS018900
SyntenyMS018900
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152801.1 probable calcium-binding protein CML11 [Cucumis sativus]3.8e-2771.6Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SN+PLSRE +KEIFKYHDSNKDGFL++RELTKAF  +GSI+PFCKA Y + +AD + DGL++E ELDKLIDYA+K+IKK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]4.6e-41100Show/hide
Query:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN
        DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN
Subjt:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN

XP_022930012.1 calmodulin-2/4-like [Cucurbita moschata]5.0e-2776.54Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SNM  SRE MKEIF+YHDS+KDGFLN+RELTKAF FLGSIIPF KA YG+ +ADAN DGLI+E ELDKL+DYA K IKK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

XP_023530739.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]1.4e-2675.31Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SNM  SRE MKEIF+YHDS+KDGFLN+RELTKAF FLGSIIPF KA YG+ +ADAN DGLI+E ELDKL+DYA K +KK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]1.7e-2773.49Show/hide
Query:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        DRK SN+P SRE +KEIFKYHDSNKDGFLN+RELTK FG LGS+IPF KAHY + +ADA+ DGLI+E ELD+LIDY  K+IKK
Subjt:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

TrEMBL top hitse value%identityAlignment
A0A0A0KMQ1 Uncharacterized protein5.3e-2774.7Show/hide
Query:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        DRK+SNM LSRE +KEIF+YHD+N DGFLN  ELTKAF FLGS+ PF KA YG+V+ADAN DGLI+E ELDKLIDYA K+IKK
Subjt:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

A0A0A0LRC8 Uncharacterized protein1.8e-2771.6Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SN+PLSRE +KEIFKYHDSNKDGFL++RELTKAF  +GSI+PFCKA Y + +AD + DGL++E ELDKLIDYA+K+IKK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

A0A6J1CSH1 probable calcium-binding protein CML152.2e-41100Show/hide
Query:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN
        DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN
Subjt:  DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN

A0A6J1EP72 calmodulin-2/4-like2.4e-2776.54Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SNM  SRE MKEIF+YHDS+KDGFLN+RELTKAF FLGSIIPF KA YG+ +ADAN DGLI+E ELDKL+DYA K IKK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

A0A6J1GII5 probable calcium-binding protein CML117.0e-2774.07Show/hide
Query:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK
        K SN+PLSRE +K+IFKY+DS+KDGFLN+RE+TKAF FLGSI PF KA Y +  ADANNDGLI+E EL+KLIDYAYK+IKK
Subjt:  KTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29025.1 Calcium-binding EF-hand family protein6.3e-0440.58Show/hide
Query:  NMPLSREHMKEIFKYHDSNKDGFLNV---RELTKAFGFLGSIIPFCK--AHYGLVHADANNDGLINETE
        N  L +E +K +FK  D NKDG + V   ++LT  FG LG +       A   L   D+N DG I+ETE
Subjt:  NMPLSREHMKEIFKYHDSNKDGFLNV---RELTKAFGFLGSIIPFCK--AHYGLVHADANNDGLINETE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATAGAAAGACATCTAATATGCCACTTAGTCGGGAGCACATGAAGGAGATTTTCAAATATCATGATAGCAACAAGGACGGTTTTCTCAACGTAAGGGAGCTAACAAAAGC
TTTTGGCTTTCTCGGCTCAATTATTCCATTCTGCAAAGCTCACTATGGTCTGGTTCATGCTGATGCTAATAACGATGGCCTTATCAATGAGACTGAGCTTGACAAGCTCA
TCGATTATGCCTATAAGGTCATCAAGAAGAAT
mRNA sequenceShow/hide mRNA sequence
GATAGAAAGACATCTAATATGCCACTTAGTCGGGAGCACATGAAGGAGATTTTCAAATATCATGATAGCAACAAGGACGGTTTTCTCAACGTAAGGGAGCTAACAAAAGC
TTTTGGCTTTCTCGGCTCAATTATTCCATTCTGCAAAGCTCACTATGGTCTGGTTCATGCTGATGCTAATAACGATGGCCTTATCAATGAGACTGAGCTTGACAAGCTCA
TCGATTATGCCTATAAGGTCATCAAGAAGAAT
Protein sequenceShow/hide protein sequence
DRKTSNMPLSREHMKEIFKYHDSNKDGFLNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYKVIKKN