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MS018912 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018912
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOligouridylate binding protein 1B isoform 1
Genome locationscaffold89:333582..333742
RNA-Seq ExpressionMS018912
SyntenyMS018912
Gene Ontology termsGO:0006506 - GPI anchor biosynthetic process (biological process)
GO:0097056 - selenocysteinyl-tRNA(Sec) biosynthetic process (biological process)
GO:0097502 - mannosylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004376 - glycolipid mannosyltransferase activity (molecular function)
GO:0004828 - serine-tRNA ligase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0051751 - alpha-1,4-mannosyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD46666.1 TPA_asm: hypothetical protein HUJ06_016603 [Nelumbo nucifera]4.2e-0877.5Show/hide
Query:  VNCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        ++CRALP R+PFQKFS A AEPRPKRGFGNSFQPAI + R
Subjt:  VNCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
EEF33495.1 conserved hypothetical protein [Ricinus communis]7.9e-0774.36Show/hide
Query:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        NCR LP+R+PFQKFSKA  +P PKRGFGNSFQPAI + R
Subjt:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
KAG6572411.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia]8.4e-0986.49Show/hide
Query:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        RALPRR+PFQKFSKAWA+PRPKRGFGNSFQPAI + R
Subjt:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
OMO87319.1 hypothetical protein CCACVL1_09133 [Corchorus capsularis]1.4e-0882.05Show/hide
Query:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        NCRALPRR+PFQKFSKA  +PRPKRGFGNSFQPAI + R
Subjt:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
RZC28174.1 hypothetical protein D0Y65_000267 [Glycine soja]7.9e-0783.78Show/hide
Query:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        RALP R+PFQKFSKA AEPRPKRGFGNSFQPAI + R
Subjt:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
TrEMBL top hitse value%identityAlignment
A0A1R3IXK6 Uncharacterized protein6.9e-0982.05Show/hide
Query:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        NCRALPRR+PFQKFSKA  +PRPKRGFGNSFQPAI + R
Subjt:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
A0A2C9UQ09 Uncharacterized protein (Fragment)3.4e-0879.49Show/hide
Query:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        NCRALPRR+PFQKFS A  +PRPKRGFGNSFQPAI + R
Subjt:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
A0A445LY15 Uncharacterized protein3.8e-0783.78Show/hide
Query:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        RALP R+PFQKFSKA AEPRPKRGFGNSFQPAI + R
Subjt:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
A0A6A3A274 Oligouridylate binding protein 1B isoform 11.1e-0678.38Show/hide
Query:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        RALPRR+PF+KFSKA ++PRPKRGFGNSFQPAI + R
Subjt:  RALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
B9SSA2 Uncharacterized protein3.8e-0774.36Show/hide
Query:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
        NCR LP+R+PFQKFSKA  +P PKRGFGNSFQPAI + R
Subjt:  NCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAAATTGTAGGGCTTTACCCCGAAGGAAGCCCTTCCAGAAATTCTCGAAGGCCTGGGCCGAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGC
CTCGGTTAGAACCTCACTAGCTGCGTCATTGCCCCAAGCGCAAAGA
mRNA sequenceShow/hide mRNA sequence
GTAAATTGTAGGGCTTTACCCCGAAGGAAGCCCTTCCAGAAATTCTCGAAGGCCTGGGCCGAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGC
CTCGGTTAGAACCTCACTAGCTGCGTCATTGCCCCAAGCGCAAAGA
Protein sequenceShow/hide protein sequence
VNCRALPRRKPFQKFSKAWAEPRPKRGFGNSFQPAIASVRTSLAASLPQAQR