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MS018918 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018918
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb domain protein 77
Genome locationscaffold89:403315..403644
RNA-Seq ExpressionMS018918
SyntenyMS018918
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033571.1 transcription factor MYB44-like [Cucumis melo var. makuwa]2.5e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

XP_004152727.1 transcription factor MYB44 [Cucumis sativus]2.5e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

XP_008444647.1 PREDICTED: transcription factor MYB44-like [Cucumis melo]2.5e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

XP_022144294.1 transcription factor MYB1-like [Momordica charantia]2.4e-58100Show/hide
Query:  ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN
        ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN
Subjt:  ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN

Query:  HWNSTLKRRA
        HWNSTLKRRA
Subjt:  HWNSTLKRRA

XP_038885826.1 transcription factor MYB25-like [Benincasa hispida]1.1e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSP EDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

TrEMBL top hitse value%identityAlignment
A0A0A0LKY3 Uncharacterized protein1.2e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

A0A1S3BAB9 transcription factor MYB44-like1.2e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

A0A5A7SVX1 Transcription factor MYB44-like1.2e-5597.22Show/hide
Query:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
        RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW
Subjt:  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRRA
        NSTLKRRA
Subjt:  NSTLKRRA

A0A6J1CRX2 transcription factor MYB1-like1.2e-58100Show/hide
Query:  ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN
        ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN
Subjt:  ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKN

Query:  HWNSTLKRRA
        HWNSTLKRRA
Subjt:  HWNSTLKRRA

A0A6J1GI94 transcription factor MYB44-like2.1e-5596.33Show/hide
Query:  SRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNH
        SRRPEKIKGPWSAEEDRIL QLV RYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHRPFS TEDETILAAHARFGNRWATIARLLPGRTDNAVKNH
Subjt:  SRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNH

Query:  WNSTLKRRA
        WNSTLKRRA
Subjt:  WNSTLKRRA

SwissProt top hitse value%identityAlignment
O04192 Transcription factor MYB252.7e-3664.08Show/hide
Query:  KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTL
        K+KGPW  E+D  LT+LV   GPRNW+LISR I GRSGKSCRLRWCNQL P ++ +PFS  E+  I++A A  GN+W+ IA+LLPGRTDNA+KNHWNS L
Subjt:  KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTL

Query:  KRR
        +R+
Subjt:  KRR

O23160 Transcription factor MYB739.4e-4577.88Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR FS  EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Q42575 Transcription factor MYB12.9e-3865.09Show/hide
Query:  RPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWN
        R +++KGPWS EED +L++LV R G RNWS I+R I GRSGKSCRLRWCNQL+P++    F+  ED+ I+AAHA  GN+WA IA+LLPGRTDNA+KNHWN
Subjt:  RPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWN

Query:  STLKRR
        S L+RR
Subjt:  STLKRR

Q9FDW1 Transcription factor MYB442.1e-4477.88Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS  EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Q9SN12 Transcription factor MYB771.2e-4476.92Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFSP EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Arabidopsis top hitse value%identityAlignment
AT2G23290.1 myb domain protein 705.6e-4575.96Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        ++IKGPWS EED +L  LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR F+  ED+TI+ AHARFGN+WATIARLL GRTDNA+KNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT3G50060.1 myb domain protein 778.7e-4676.92Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFSP EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT3G55730.1 myb domain protein 1098.4e-4168.93Show/hide
Query:  KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTL
        K+KGPWS EED +LT+LV + GPRNWSLI+R I GRSGKSCRLRWCNQL P ++ +PFS  ED  I++AHA  GN+WA IA+LL GRTDNA+KNHWNSTL
Subjt:  KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTL

Query:  KRR
        +R+
Subjt:  KRR

AT4G37260.1 myb domain protein 736.7e-4677.88Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR FS  EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT5G67300.1 myb domain protein r11.5e-4577.88Show/hide
Query:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST
        ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS  EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNST
Subjt:  EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGTCGAGGCGGCCGGAGAAGATCAAAGGGCCGTGGAGCGCGGAGGAGGACCGGATTTTAACCCAGCTCGTCGGCCGGTACGGGCCGAGAAATTGGTCGTTGATTAGCCG
GTATATTAAGGGCCGGTCCGGGAAATCGTGCCGGCTCCGGTGGTGTAACCAGCTGAGCCCGAGTGTGGAGCACCGGCCATTTTCTCCGACGGAGGATGAGACCATTTTGG
CCGCGCATGCCCGGTTCGGCAACCGGTGGGCCACCATTGCGCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAATCATTGGAACTCGACGCTAAAGCGAAGGGCG
mRNA sequenceShow/hide mRNA sequence
GCGTCGAGGCGGCCGGAGAAGATCAAAGGGCCGTGGAGCGCGGAGGAGGACCGGATTTTAACCCAGCTCGTCGGCCGGTACGGGCCGAGAAATTGGTCGTTGATTAGCCG
GTATATTAAGGGCCGGTCCGGGAAATCGTGCCGGCTCCGGTGGTGTAACCAGCTGAGCCCGAGTGTGGAGCACCGGCCATTTTCTCCGACGGAGGATGAGACCATTTTGG
CCGCGCATGCCCGGTTCGGCAACCGGTGGGCCACCATTGCGCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAATCATTGGAACTCGACGCTAAAGCGAAGGGCG
Protein sequenceShow/hide protein sequence
ASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRA