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MS018920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTelomere maintenance component 1, putative isoform 1
Genome locationscaffold89:415257..415634
RNA-Seq ExpressionMS018920
SyntenyMS018920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063096.1 putative transmembrane protein [Cucumis melo var. makuwa]2.2e-4279.67Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MS PIEQQSP  PG+QQ Y GH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S A  ++   
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  ATMAVQTQQETKQEEPASQNPSA
         TMAV TQQETKQEEPASQNPSA
Subjt:  ATMAVQTQQETKQEEPASQNPSA

KAG6598392.1 hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4382.26Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSPPA GM  PYGGH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG +IMGYGHFDLESWAETKCSSCIDGRIS  PPR NVS A  A+   
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  ATMAVQTQQETKQEEPASQNPSAT
         TMAV+TQQETKQEEPASQNP+A+
Subjt:  ATMAVQTQQETKQEEPASQNPSAT

XP_022144319.1 uncharacterized protein LOC111014030 [Momordica charantia]3.9e-60100Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  ATMAVQTQQETKQEEPASQNPSATNA
        ATMAVQTQQETKQEEPASQNPSATNA
Subjt:  ATMAVQTQQETKQEEPASQNPSATNA

XP_031737057.1 uncharacterized protein LOC116402140 [Cucumis sativus]5.1e-4482.26Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSP  PGMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S    A++LP
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  A-TMAVQTQQETKQEEPASQNPSA
        A TMAV TQQETKQEEPASQNPSA
Subjt:  A-TMAVQTQQETKQEEPASQNPSA

XP_038885752.1 uncharacterized protein LOC120076044 [Benincasa hispida]4.8e-4281.75Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSPPA  MQQ YGGH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRISPPPPR +  AA  A +LP
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  A-TMAVQTQQETK--QEEPASQNPSA
        A TMA + QQETK  QEEPASQNP A
Subjt:  A-TMAVQTQQETK--QEEPASQNPSA

TrEMBL top hitse value%identityAlignment
A0A0A0LP67 Uncharacterized protein2.5e-4482.26Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSP  PGMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S    A++LP
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  A-TMAVQTQQETKQEEPASQNPSA
        A TMAV TQQETKQEEPASQNPSA
Subjt:  A-TMAVQTQQETKQEEPASQNPSA

A0A5A7V9H6 Putative transmembrane protein1.0e-4279.67Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MS PIEQQSP  PG+QQ Y GH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S A  ++   
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  ATMAVQTQQETKQEEPASQNPSA
         TMAV TQQETKQEEPASQNPSA
Subjt:  ATMAVQTQQETKQEEPASQNPSA

A0A6J1CRZ5 uncharacterized protein LOC1110140301.9e-60100Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
        MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALP

Query:  ATMAVQTQQETKQEEPASQNPSATNA
        ATMAVQTQQETKQEEPASQNPSATNA
Subjt:  ATMAVQTQQETKQEEPASQNPSATNA

A0A6J1KK79 uncharacterized protein LOC1114960283.4e-4181.3Show/hide
Query:  MSLPIEQQSPPAPGMQQPYGGHLSN-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATAL
        MSLPI+QQSPPAPGMQQPYGGH S+ GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLE WAE KCSSCIDGRIS P PR NVS  T A +L
Subjt:  MSLPIEQQSPPAPGMQQPYGGHLSN-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATAL

Query:  P-ATMAVQTQQETKQEEPASQNP
        P ATM+VQTQ    Q+EPASQNP
Subjt:  P-ATMAVQTQQETKQEEPASQNP

A0A6P4ABB2 uncharacterized protein LOC1074209053.8e-2959.68Show/hide
Query:  MSLPI-EQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATAL
        M++P+ EQ  PPA  +QQP+  H ++GS+GP+I VLVVIIV  ++AV+VGRLCSGK++MGYG FDLESWAE KCSSCIDG+I+ P PR N+S   +  ++
Subjt:  MSLPI-EQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATAL

Query:  PATMAVQTQQETKQEEPASQNPSA
        P TM V+T QE  QEE +S NPSA
Subjt:  PATMAVQTQQETKQEEPASQNPSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein2.0e-1737.76Show/hide
Query:  SLPIEQQSPPAPGMQQPYGGHLS--NGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISP--------PPPRANVS
        S+P+  Q PPA  + Q      S  N ++GP I V +V+ V  V+A V+GRLCSGKTI+GYG +D+E WAE++C SCIDG I P        PPPR  + 
Subjt:  SLPIEQQSPPAPGMQQPYGGHLS--NGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISP--------PPPRANVS

Query:  AATTATALPATMAVQ--------TQQETKQEEPASQNPSATNA
          ++  +  +   V          +Q++   EP  Q PS+ ++
Subjt:  AATTATALPATMAVQ--------TQQETKQEEPASQNPSATNA

AT3G57500.1 unknown protein1.8e-0739.51Show/hide
Query:  PGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRI-------SPPPP
        P   QP   +  + S+  ++ VL VI + +V+A V  RLC G+ +   G  D+E W E KC SCID  I       SPPPP
Subjt:  PGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRI-------SPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTCCCAATTGAACAACAATCTCCGCCGGCGCCGGGAATGCAGCAGCCGTACGGCGGCCATCTCAGCAACGGCTCCGTGGGTCCGGTCATCGGCGTCCTCGTCGT
CATCATTGTCTTCGCCGTGGTCGCCGTCGTGGTCGGGCGGCTGTGCTCGGGGAAGACCATCATGGGCTACGGCCATTTCGATTTGGAGAGCTGGGCGGAGACCAAATGCT
CCTCTTGCATCGACGGAAGAATCAGCCCGCCGCCCCCGAGGGCCAATGTCTCCGCCGCCACCACCGCCACCGCTCTTCCGGCGACAATGGCCGTCCAAACCCAGCAAGAA
ACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCACCAACGCT
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTCCCAATTGAACAACAATCTCCGCCGGCGCCGGGAATGCAGCAGCCGTACGGCGGCCATCTCAGCAACGGCTCCGTGGGTCCGGTCATCGGCGTCCTCGTCGT
CATCATTGTCTTCGCCGTGGTCGCCGTCGTGGTCGGGCGGCTGTGCTCGGGGAAGACCATCATGGGCTACGGCCATTTCGATTTGGAGAGCTGGGCGGAGACCAAATGCT
CCTCTTGCATCGACGGAAGAATCAGCCCGCCGCCCCCGAGGGCCAATGTCTCCGCCGCCACCACCGCCACCGCTCTTCCGGCGACAATGGCCGTCCAAACCCAGCAAGAA
ACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCACCAACGCT
Protein sequenceShow/hide protein sequence
MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALPATMAVQTQQE
TKQEEPASQNPSATNA