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MS018941 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018941
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCT-theta
Genome locationscaffold69:265416..265562
RNA-Seq ExpressionMS018941
SyntenyMS018941
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005832 - chaperonin-containing T-complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR017998 - Chaperone tailless complex polypeptide 1 (TCP-1)


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4303682.1 unnamed protein product [Prunus armeniaca]2.1e-0987.5Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAK
        +AKVEELIK+VA+SG KVIVSGAAVGEMALHFCERYKY K
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAK
GAY39921.1 hypothetical protein CUMW_048070 [Citrus unshiu]5.5e-1080.85Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLF
        +AKVE LIK+VA SGA+VIVSGAAVGEMALHFCERYKY KF F  LF
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLF
KAF9670251.1 hypothetical protein SADUNF_Sadunf13G0048900 [Salix dunnii]5.5e-1087.8Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKF
        +AKVEELIK+VA+SGAKVIVSGAAVGEMALHFCERYKY  F
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKF
KAG2258755.1 hypothetical protein Bca52824_078049 [Brassica carinata]2.1e-0980.95Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFS
        +AKVE+LIK+VA SGAKVIVSG +VGEMALHFCERYKY KF+
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFS
XP_034924946.1 T-complex protein 1 subunit theta-like [Populus alba]2.7e-0975.51Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VANSGAKVIVSGAAVGEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
TrEMBL top hitse value%identityAlignment
A0A2H5NJ24 Uncharacterized protein2.7e-1080.85Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLF
        +AKVE LIK+VA SGA+VIVSGAAVGEMALHFCERYKY KF F  LF
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLF
A0A4U5QAD8 CCT-theta1.3e-0975.51Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VANSGAKVIVSGAAVGEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
A0A6J5WVG6 Uncharacterized protein1.0e-0987.5Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAK
        +AKVEELIK+VA+SG KVIVSGAAVGEMALHFCERYKY K
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAK
A9P9J0 CCT-theta1.3e-0975.51Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VANSGAKVIVSGAAVGEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
B9IPP6 CCT-theta1.3e-0975.51Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VANSGAKVIVSGAAVGEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
SwissProt top hitse value%identityAlignment
Q552J0 T-complex protein 1 subunit theta4.7e-0452.94Show/hide
Query:  VEELIKSVANSGAKVIVSGAAVGEMALHFCERYK
        + E I ++AN+G KVI+SG+ V E+ALH+ ER+K
Subjt:  VEELIKSVANSGAKVIVSGAAVGEMALHFCERYK
Q94K05 T-complex protein 1 subunit theta1.5e-1067.35Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VA SGAKVIVSG ++GEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
Arabidopsis top hitse value%identityAlignment
AT3G03960.1 TCP-1/cpn60 chaperonin family protein1.1e-1167.35Show/hide
Query:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV
        +AKVEELIK+VA SGAKVIVSG ++GEMALHFCERYK      S  F +
Subjt:  DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGCTAAAGTTGAGGAGCTGATAAAATCAGTTGCCAACTCTGGTGCTAAAGTAATTGTTAGTGGAGCAGCTGTTGGGGAAATGGCTCTACACTTTTGTGAACGCTACAA
GTATGCCAAGTTTTCCTTCTCTCTGTTGTTTTCTGTT
mRNA sequenceShow/hide mRNA sequence
GATGCTAAAGTTGAGGAGCTGATAAAATCAGTTGCCAACTCTGGTGCTAAAGTAATTGTTAGTGGAGCAGCTGTTGGGGAAATGGCTCTACACTTTTGTGAACGCTACAA
GTATGCCAAGTTTTCCTTCTCTCTGTTGTTTTCTGTT
Protein sequenceShow/hide protein sequence
DAKVEELIKSVANSGAKVIVSGAAVGEMALHFCERYKYAKFSFSLLFSV