; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018947 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018947
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold20:83564..84217
RNA-Seq ExpressionMS018947
SyntenyMS018947
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
P08221.1 RecName: Full=Chlorophyll a-b binding protein of LHCII type I, chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor [Cucumis sativus]6.6e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

XP_004134608.2 chlorophyll a-b binding protein of LHCII type 1 [Cucumis sativus]6.6e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

XP_008439659.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]6.6e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

XP_011658281.1 chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus]6.6e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

XP_022159070.1 chlorophyll a-b binding protein of LHCII type 1 [Momordica charantia]7.1e-126100Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADHLADPVNNNAWAYATN
Subjt:  ADHLADPVNNNAWAYATN

TrEMBL top hitse value%identityAlignment
A0A0A0KI21 Chlorophyll a-b binding protein, chloroplastic3.2e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

A0A0A0KKK7 Chlorophyll a-b binding protein, chloroplastic3.2e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

A0A5D3CNU3 Chlorophyll a-b binding protein, chloroplastic3.2e-12499.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

A0A6J1DXL6 Chlorophyll a-b binding protein, chloroplastic3.4e-126100Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADHLADPVNNNAWAYATN
Subjt:  ADHLADPVNNNAWAYATN

A0A6J1KEF6 Chlorophyll a-b binding protein, chloroplastic3.2e-12497.71Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        +SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNP LVHAQSILAIWACQ+VLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADHLADPVNNNAWAYATN
Subjt:  ADHLADPVNNNAWAYATN

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic5.3e-12495.87Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        ASSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADHLADPVNNNAWA+ATN
Subjt:  ADHLADPVNNNAWAYATN

P07371 Chlorophyll a-b binding protein AB80, chloroplastic1.2e-12395.87Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        ASSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNP LVHAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADHLADPVNNNAW+YATN
Subjt:  ADHLADPVNNNAWAYATN

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)8.7e-12799.08Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

P09756 Chlorophyll a-b binding protein 3, chloroplastic1.4e-12497.24Show/hide
Query:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
        SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL
Subjt:  SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL

Query:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        DYLGNP L+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  DYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLA PVNNNAWAYATN
Subjt:  DHLADPVNNNAWAYATN

P12329 Chlorophyll a-b binding protein 1, chloroplastic7.4e-12696.79Show/hide
Query:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
        A+SGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG
Subjt:  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG

Query:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
        LDYLGNP L+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL
Subjt:  LDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL

Query:  ADHLADPVNNNAWAYATN
        ADH+ADPVNNNAWAYATN
Subjt:  ADHLADPVNNNAWAYATN

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 37.6e-11891.71Show/hide
Query:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD
        SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLD
Subjt:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD

Query:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        YLGNP LVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Subjt:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWA+ATN
Subjt:  DHLADPVNNNAWAYATN

AT1G29920.1 chlorophyll A/B-binding protein 27.6e-11891.71Show/hide
Query:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD
        SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLD
Subjt:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD

Query:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        YLGNP LVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Subjt:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWA+ATN
Subjt:  DHLADPVNNNAWAYATN

AT1G29930.1 chlorophyll A/B binding protein 17.6e-11891.71Show/hide
Query:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD
        SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLD
Subjt:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD

Query:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        YLGNP LVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Subjt:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWA+ATN
Subjt:  DHLADPVNNNAWAYATN

AT2G34420.1 photosystem II light harvesting complex gene B1B25.2e-11992.63Show/hide
Query:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD
        SGSPWYG DRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLD
Subjt:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD

Query:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        YLGNP LVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWA+ATN
Subjt:  DHLADPVNNNAWAYATN

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B15.2e-11992.63Show/hide
Query:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD
        SGSPWYG DRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLD
Subjt:  SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD

Query:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
        YLGNP LVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Subjt:  YLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA

Query:  DHLADPVNNNAWAYATN
        DHLADPVNNNAWA+ATN
Subjt:  DHLADPVNNNAWAYATN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTCCTCAGGCAGCCCGTGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAATTCCCTGGTGACTATGGTTG
GGATACCGCAGGTCTATCGGCTGATCCCGAAACCTTTGCTAAGAACCGGGAGCTCGAAGTGATTCATAGTAGATGGGCTATGCTTGGAGCTCTAGGATGTGTATTCCCAG
AGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAGGTCTTGTT
CATGCACAAAGCATTTTGGCCATCTGGGCATGTCAAGTAGTGTTAATGGGTGCAGTTGAGGGTTACCGTATTGCCGGAGGACCACTCGGGGAAGTTACTGATCCCATTTA
TCCCGGGGGTAGCTTTGATCCCCTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTCAAGAACGGCCGACTTGCAATGTTTTCCATGTTCG
GGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGACCCTGTCAACAACAATGCATGGGCTTATGCTACCAAC
mRNA sequenceShow/hide mRNA sequence
GCTTCCTCAGGCAGCCCGTGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAATTCCCTGGTGACTATGGTTG
GGATACCGCAGGTCTATCGGCTGATCCCGAAACCTTTGCTAAGAACCGGGAGCTCGAAGTGATTCATAGTAGATGGGCTATGCTTGGAGCTCTAGGATGTGTATTCCCAG
AGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAGGTCTTGTT
CATGCACAAAGCATTTTGGCCATCTGGGCATGTCAAGTAGTGTTAATGGGTGCAGTTGAGGGTTACCGTATTGCCGGAGGACCACTCGGGGAAGTTACTGATCCCATTTA
TCCCGGGGGTAGCTTTGATCCCCTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTCAAGAACGGCCGACTTGCAATGTTTTCCATGTTCG
GGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGACCCTGTCAACAACAATGCATGGGCTTATGCTACCAAC
Protein sequenceShow/hide protein sequence
ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLV
HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN