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MS018952 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018952
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold20:169311..169742
RNA-Seq ExpressionMS018952
SyntenyMS018952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581317.1 hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1845.58Show/hide
Query:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAIEDDPKRADVWMPCFLLEDFEEEEVIKF
        ME S KRKR E+D      SD+ +IE+FSEIV+ FR PY+WFRAK++ S       D N++ +   +   + ++       VWMPCFL+EDFEE+EVIK 
Subjt:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAIEDDPKRADVWMPCFLLEDFEEEEVIKF

Query:  RKSTPLRRSET---AAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL
         K+  L +S+T   AAAAA        GG   +KK + +ELDLRLSL
Subjt:  RKSTPLRRSET---AAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL

KAG6606917.1 hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia]6.1e-3361.81Show/hide
Query:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAIEDDPKRADVWMPCFLLEDFEEEEVIKF
        ME S KRKR EN DG+ N SDEAD+E+F EIVEKFR PYDWFRAKMS S  +        D R ++KKK+K +EDD KR DVWMP FLLEDFEEEEVIKF
Subjt:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAIEDDPKRADVWMPCFLLEDFEEEEVIKF

Query:  RKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL
         KST LR+SET A A           GG E+K N E LDLRL L
Subjt:  RKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL

KGN58537.1 hypothetical protein Csa_002705 [Cucumis sativus]1.6e-2048.63Show/hide
Query:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAI--EDDPKRADVWMPCFLLEDFEEEEVI
        M+ S KRKR +N     N ++E +I++FSEIVEKFR PY+WFRA+MS  +        N  DR+++KKK      ++D    DVWMPCFLL+DFEEEEVI
Subjt:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAI--EDDPKRADVWMPCFLLEDFEEEEVI

Query:  KFRKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL
        K  K+  + R ETA  AAE   ++ GG    EK    E+L+LRLSL
Subjt:  KFRKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY6 Uncharacterized protein7.5e-2148.63Show/hide
Query:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAI--EDDPKRADVWMPCFLLEDFEEEEVI
        M+ S KRKR +N     N ++E +I++FSEIVEKFR PY+WFRA+MS  +        N  DR+++KKK      ++D    DVWMPCFLL+DFEEEEVI
Subjt:  MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAI--EDDPKRADVWMPCFLLEDFEEEEVI

Query:  KFRKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL
        K  K+  + R ETA  AAE   ++ GG    EK    E+L+LRLSL
Subjt:  KFRKSTPLRRSETAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTCCAGCAAGAGGAAGAGGATCGAGAATGACGACGGATCAGACAATGGCAGCGATGAGGCGGACATCGAGAGATTCAGCGAGATCGTCGAGAAATTCCGCGG
TCCGTACGACTGGTTTAGGGCTAAAATGTCCGATTCCGCCATGGATTTGCTTCGCACTGATACGAATCGCGACGATCGGAGGCAGAGGAAGAAGAAGGAGAAGGCAATTG
AAGACGATCCGAAGCGAGCCGACGTTTGGATGCCGTGTTTCCTCCTGGAAGATTTCGAAGAGGAGGAGGTGATCAAGTTCCGGAAATCGACGCCGCTGCGGAGATCGGAG
ACGGCGGCGGCGGCGGCGGAGGATTTAGTAACGATCGGCGGCGGAGGCGGAGGCGTGGAGAAGAAGGCGAATTGCGAAGAGTTAGACCTCCGACTCTCTCTT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTCCAGCAAGAGGAAGAGGATCGAGAATGACGACGGATCAGACAATGGCAGCGATGAGGCGGACATCGAGAGATTCAGCGAGATCGTCGAGAAATTCCGCGG
TCCGTACGACTGGTTTAGGGCTAAAATGTCCGATTCCGCCATGGATTTGCTTCGCACTGATACGAATCGCGACGATCGGAGGCAGAGGAAGAAGAAGGAGAAGGCAATTG
AAGACGATCCGAAGCGAGCCGACGTTTGGATGCCGTGTTTCCTCCTGGAAGATTTCGAAGAGGAGGAGGTGATCAAGTTCCGGAAATCGACGCCGCTGCGGAGATCGGAG
ACGGCGGCGGCGGCGGCGGAGGATTTAGTAACGATCGGCGGCGGAGGCGGAGGCGTGGAGAAGAAGGCGAATTGCGAAGAGTTAGACCTCCGACTCTCTCTT
Protein sequenceShow/hide protein sequence
MESSSKRKRIENDDGSDNGSDEADIERFSEIVEKFRGPYDWFRAKMSDSAMDLLRTDTNRDDRRQRKKKEKAIEDDPKRADVWMPCFLLEDFEEEEVIKFRKSTPLRRSE
TAAAAAEDLVTIGGGGGGVEKKANCEELDLRLSL