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MS018956 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018956
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDihydroorotate dehydrogenase, putative
Genome locationscaffold20:214031..214192
RNA-Seq ExpressionMS018956
SyntenyMS018956
Gene Ontology termsNA
InterPro domainsIPR009297 - Protein of unknown function DUF952


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606920.1 hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2190.74Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S GR+ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
XP_022157011.1 uncharacterized protein LOC111023838 [Momordica charantia]1.4e-2298.15Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
XP_022948943.1 uncharacterized protein LOC111452443 [Cucurbita moschata]9.9e-2190.74Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S GR+ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
XP_022998502.1 uncharacterized protein LOC111493116 [Cucurbita maxima]2.9e-2088.89Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S G++ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
XP_023525461.1 uncharacterized protein LOC111789057 isoform X1 [Cucurbita pepo subsp. pepo]2.9e-2088.89Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S G++ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
TrEMBL top hitse value%identityAlignment
A0A5C7I2N3 Uncharacterized protein3.4e-1983.02Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFL
        +LGDGLIYELVDG+NSFPHFYGPS+SF+P+P+DAVTKAEKLTLS GR++CSFL
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFL
A0A6J1DWP8 uncharacterized protein LOC1110238386.7e-2398.15Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
A0A6J1GAQ2 uncharacterized protein LOC1114524434.8e-2190.74Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S GR+ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
A0A6J1K865 uncharacterized protein LOC1114931161.4e-2088.89Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LGDGL+YELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLT S G++ACSFLE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
A0A6J5U620 Uncharacterized protein7.7e-1981.48Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
        +LG+GLIYE+VDGSNSFPHFYGPSRSFSP+P+DAVTKAEKL+LS GR++CS LE
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01897.1 unknown protein3.2e-1766.04Show/hide
Query:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFL
        +LGDGLIYE VD  NSFPHFYGP ++F P+P+D+V KAEKLT   G + CSFL
Subjt:  QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGATGCAGTAACCAA
AGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA
mRNA sequenceShow/hide mRNA sequence
CAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGATGCAGTAACCAA
AGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA
Protein sequenceShow/hide protein sequence
QLGDGLIYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTLSGGRYACSFLE