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MS018968 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018968
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold20:325692..327313
RNA-Seq ExpressionMS018968
SyntenyMS018968
Gene Ontology termsNA
InterPro domainsIPR009297 - Protein of unknown function DUF952


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606920.1 hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5284.43Show/hide
Query:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI
        A A+EFVYRIS SKEWE S+S G+++GG+FD  SGFIHLSNLNQVQ TLQNFF N+KEELYLLQIEAKKLGDGL+YELVDGSNSFPHFYGPSRSFSPIPI
Subjt:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI

Query:  DAVTKAEKLTLSGGRYACSFLE
        DAVTKAEKLT S GR+ACSFLE
Subjt:  DAVTKAEKLTLSGGRYACSFLE

XP_022157011.1 uncharacterized protein LOC111023838 [Momordica charantia]1.8e-6399.19Show/hide
Query:  MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPI
        MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIE KKLGDGLIYELVDGSNSFPHFYGPSRSFSPI
Subjt:  MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPI

Query:  PIDAVTKAEKLTLSGGRYACSFLE
        PIDAVTKAEKLTLSGGRYACSFLE
Subjt:  PIDAVTKAEKLTLSGGRYACSFLE

XP_022948943.1 uncharacterized protein LOC111452443 [Cucurbita moschata]1.8e-5284.43Show/hide
Query:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI
        A A+EFVYRIS SKEWE S+S G+++GG+FD  SGFIHLSNLNQVQ TLQNFF N+KEELYLLQIEAKKLGDGL+YELVDGSNSFPHFYGPSRSFSPIPI
Subjt:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI

Query:  DAVTKAEKLTLSGGRYACSFLE
        DAVTKAEKLT S GR+ACSFLE
Subjt:  DAVTKAEKLTLSGGRYACSFLE

XP_023525461.1 uncharacterized protein LOC111789057 isoform X1 [Cucurbita pepo subsp. pepo]4.1e-5283.61Show/hide
Query:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI
        A A+EFVYRIS SKEWE S+S G+++GG+FD  SGFIHLSNLNQVQ TLQNFF N+KEELYLLQIEAKKLGDGL+YELVDGSNSFPHFYGPSRSFSPIPI
Subjt:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI

Query:  DAVTKAEKLTLSGGRYACSFLE
        DAVTKAEKLT S G++ACSFLE
Subjt:  DAVTKAEKLTLSGGRYACSFLE

XP_038905017.1 uncharacterized protein LOC120091189 [Benincasa hispida]1.8e-5281.75Show/hide
Query:  KEMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFS
        +E  AA ++FVYRISTSKEW+ES+  GHIYGG+FD  SGFIHLSNLNQVQ TLQNFF N K+ELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSF 
Subjt:  KEMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFS

Query:  PIPIDAVTKAEKLTLSGGRYACSFLE
        PIP+DAVTKAEKLT S GR+ CSFLE
Subjt:  PIPIDAVTKAEKLTLSGGRYACSFLE

TrEMBL top hitse value%identityAlignment
A0A1S3BHG9 uncharacterized protein LOC1034899012.4e-5079.2Show/hide
Query:  EMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSP
        E  AA +EFVYRISTSKEW+ES+  GHIYGG  D  SGFIHLSNLNQVQ TLQNFF N K++LYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSFSP
Subjt:  EMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSP

Query:  IPIDAVTKAEKLTLSGGRYACSFLE
        IP+DAVTKA+K+T S GR++CS LE
Subjt:  IPIDAVTKAEKLTLSGGRYACSFLE

A0A5D3DA97 Uncharacterized protein2.4e-5079.2Show/hide
Query:  EMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSP
        E  AA +EFVYRISTSKEW+ES+  GHIYGG  D  SGFIHLSNLNQVQ TLQNFF N K++LYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSFSP
Subjt:  EMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSP

Query:  IPIDAVTKAEKLTLSGGRYACSFLE
        IP+DAVTKA+K+T S GR++CS LE
Subjt:  IPIDAVTKAEKLTLSGGRYACSFLE

A0A6J1DWP8 uncharacterized protein LOC1110238388.5e-6499.19Show/hide
Query:  MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPI
        MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIE KKLGDGLIYELVDGSNSFPHFYGPSRSFSPI
Subjt:  MEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPI

Query:  PIDAVTKAEKLTLSGGRYACSFLE
        PIDAVTKAEKLTLSGGRYACSFLE
Subjt:  PIDAVTKAEKLTLSGGRYACSFLE

A0A6J1GAQ2 uncharacterized protein LOC1114524438.8e-5384.43Show/hide
Query:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI
        A A+EFVYRIS SKEWE S+S G+++GG+FD  SGFIHLSNLNQVQ TLQNFF N+KEELYLLQIEAKKLGDGL+YELVDGSNSFPHFYGPSRSFSPIPI
Subjt:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI

Query:  DAVTKAEKLTLSGGRYACSFLE
        DAVTKAEKLT S GR+ACSFLE
Subjt:  DAVTKAEKLTLSGGRYACSFLE

A0A6J1K865 uncharacterized protein LOC1114931162.6e-5283.61Show/hide
Query:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI
        A A+EFVYRIS SKEWE S+S G+++GG+FD  SGFIHLSNLNQVQ TLQNFF N+KEELYLLQIEAKKLGDGL+YELVDGSNSFPHFYGPSRSFSPIPI
Subjt:  AAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPI

Query:  DAVTKAEKLTLSGGRYACSFLE
        DAVTKAEKLT S G++ACSFLE
Subjt:  DAVTKAEKLTLSGGRYACSFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01897.1 unknown protein3.2e-3960.83Show/hide
Query:  AADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPID
        A +EF+YRIST +EWEE +  G  YG E D  + + HLS L+QVQ TL+NFF + KE LYLLQ++ KKLGDGLIYE VD  NSFPHFYGP ++F P+P+D
Subjt:  AADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPID

Query:  AVTKAEKLTLSGGRYACSFL
        +V KAEKLT   G + CSFL
Subjt:  AVTKAEKLTLSGGRYACSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTATCAACAAAAGCAAGGAAATGGAAGCTGCAGCAGACGAGTTTGTATACAGAATCAGTACATCCAAGGAGTGGGAAGAGTCGCGGAGCGCTGGTCATATCTATGGCGG
AGAATTCGACAACGTCTCTGGATTCATTCATCTCAGTAACCTCAATCAGGTCCAGCCAACTTTGCAGAATTTCTTCCAGAATACCAAGGAGGAATTGTATCTCCTTCAGA
TTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGAT
GCAGTAACCAAAGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA
mRNA sequenceShow/hide mRNA sequence
TCTATCAACAAAAGCAAGGAAATGGAAGCTGCAGCAGACGAGTTTGTATACAGAATCAGTACATCCAAGGAGTGGGAAGAGTCGCGGAGCGCTGGTCATATCTATGGCGG
AGAATTCGACAACGTCTCTGGATTCATTCATCTCAGTAACCTCAATCAGGTCCAGCCAACTTTGCAGAATTTCTTCCAGAATACCAAGGAGGAATTGTATCTCCTTCAGA
TTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGTCCTTCTCGAAGCTTCAGCCCTATCCCAATAGAT
GCAGTAACCAAAGCAGAGAAACTAACTCTTTCTGGTGGTCGATATGCTTGTAGTTTTCTCGAA
Protein sequenceShow/hide protein sequence
SINKSKEMEAAADEFVYRISTSKEWEESRSAGHIYGGEFDNVSGFIHLSNLNQVQPTLQNFFQNTKEELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFSPIPID
AVTKAEKLTLSGGRYACSFLE